Commit 50a30fb1 authored by Gaetan Lepage's avatar Gaetan Lepage
Browse files

python3Packages.glymur: 0.13.6 -> 0.14.4 

Diff: https://github.com/quintusdias/glymur/compare/v0.13.6...v0.14.4

Changelog: https://github.com/quintusdias/glymur/blob/refs/tags/v0.14.4/CHANGES.txt
parent fbb8e01e

pkgs/development/python-modules/glymur/default.nix

+26 −21
Original line number Diff line number Diff line
@@ -3,37 +3,39 @@ 
  stdenv,

  buildPythonPackage,

  fetchFromGitHub,

  fetchpatch,

  glibc,

  replaceVars,

  openjpeg,

  libtiff,

  glibc,



  # build-system

  setuptools,

  setuptools-scm,



  # dependencies

  lxml,

  numpy,

  openjpeg,

  pillow,



  # tests

  addBinToPathHook,

  pytestCheckHook,

  scikit-image,

  setuptools,

  replaceVars,

}:



buildPythonPackage (finalAttrs: {

  pname = "glymur";

  version = "0.13.6";

  version = "0.14.4";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "quintusdias";

    repo = "glymur";

    tag = "v${finalAttrs.version}";

    hash = "sha256-tIvDhlFPpDxC3CgBDT0RN9MM8ycY+J1hjcLXzx14Zhs=";

    hash = "sha256-9CvsknpvBIHe2HEqwN43RRhRxh8D0eHQ/T9W3/eVJlQ=";

  };



  patches = [

    # Numpy 2.x compatibility, https://github.com/quintusdias/glymur/pull/675

    (fetchpatch {

      name = "numpy2-compat.patch";

      url = "https://github.com/quintusdias/glymur/commit/89b159299035ebb05776c3b90278f410ca6dba64.patch";

      hash = "sha256-C/Q5WZmW5YtN3U8fxKljfqwKHtFLfR2LQ69Tj8SuIWg=";

    })

    (replaceVars ./set-lib-paths.patch {

      openjp2_lib = "${lib.getLib openjpeg}/lib/libopenjp2${stdenv.hostPlatform.extensions.sharedLibrary}";

      tiff_lib = "${lib.getLib libtiff}/lib/libtiff${stdenv.hostPlatform.extensions.sharedLibrary}";
@@ -41,28 +43,31 @@ buildPythonPackage (finalAttrs: { 
  ];



  postPatch = lib.optionalString (!stdenv.hostPlatform.isDarwin) ''

    substituteInPlace glymur/lib/tiff.py \

        --replace-fail "glymur_config('c')" "ctypes.CDLL('${lib.getLib glibc}/lib/libc.so.6')"

    substituteInPlace glymur/lib/_tiff.py \

        --replace-fail \

          'glymur_config("c")' \

          'ctypes.CDLL("${lib.getLib glibc}/lib/libc.so.6")'

  '';



  __propagatedImpureHostDeps = lib.optional stdenv.hostPlatform.isDarwin "/usr/lib/libc.dylib";



  build-system = [ setuptools ];

  build-system = [

    setuptools

    setuptools-scm

  ];



  dependencies = [

    lxml

    numpy

    pillow

  ];



  nativeCheckInputs = [

    addBinToPathHook

    pytestCheckHook

    scikit-image

  ];



  preCheck = ''

    export PATH="$out/bin:$PATH"

  '';



  disabledTestPaths = [

    # this test involves glymur's different ways of finding the openjpeg path on

    # fsh systems by reading an .rc file and such, and is obviated by the patch
@@ -74,7 +79,7 @@ buildPythonPackage (finalAttrs: { 
  meta = {

    description = "Tools for accessing JPEG2000 files";

    homepage = "https://github.com/quintusdias/glymur";

    changelog = "https://github.com/quintusdias/glymur/blob/${finalAttrs.src.rev}/CHANGES.txt";

    changelog = "https://github.com/quintusdias/glymur/blob/${finalAttrs.src.tag}/CHANGES.txt";

    license = lib.licenses.mit;

    maintainers = with lib.maintainers; [ tomasajt ];

  };