Unverified Commit 4e080e07 authored by Yohann Boniface's avatar Yohann Boniface Committed by GitHub
Browse files

cmtk: drop (#506861)

parents 5b3fdb13 7243f973
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pkgs/by-name/cm/cmtk/package.nix

deleted100644 → 0
+0 −59
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{
  lib,
  stdenv,
  bzip2,
  cmake,
  fetchurl,
  fftw,
  llvmPackages,
  zlib,
}:

stdenv.mkDerivation (finalAttrs: {
  pname = "cmtk";
  version = "3.3.2";

  src = fetchurl {
    name = "cmtk-source.tar.gz";
    url = "https://www.nitrc.org/frs/download.php/13188/CMTK-${finalAttrs.version}-Source.tar.gz//?i_agree=1&download_now=1";
    hash = "sha256-iE164NCOSOypZLLZfZy9RTyrS+YnY9ECqfb4QhlsMS4=";
  };

  postPatch = ''
    substituteInPlace apps/vtkxform.cxx --replace-fail \
      "float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] };" \
      "float xyzFloat[3] = { (float)xyz[0], (float)xyz[1], (float)xyz[2] };"
  '';

  nativeBuildInputs = [ cmake ];

  buildInputs = [
    bzip2
    fftw
    zlib
  ]
  ++ lib.optionals stdenv.cc.isClang [
    llvmPackages.openmp
  ];

  cmakeFlags = [
    (lib.cmakeFeature "CMAKE_CXX_STANDARD" "14")
  ]
  ++ lib.optionals (stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64) [
    (lib.cmakeFeature "CMAKE_CXX_FLAGS" "-Dfinite=isfinite")
  ];

  meta = {
    description = "Computational Morphometry Toolkit";
    mainProgram = "cmtk";
    longDescription = ''
      A software toolkit for computational morphometry of
      biomedical images, CMTK comprises a set of command line tools and a
      back-end general-purpose library for processing and I/O
    '';
    maintainers = [ ];
    platforms = lib.platforms.all;
    license = lib.licenses.gpl3Plus;
    homepage = "https://www.nitrc.org/projects/cmtk/";
  };
})
+1 −0
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@@ -505,6 +505,7 @@ mapAliases {
  cloudlogoffline = throw "cloudlogoffline has been removed"; # Added 2025-05-18
  clucene_core = warnAlias "'clucene_core' has been renamed to 'clucene-core'" clucene-core; # Added 2026-01-12
  clucene_core_2 = warnAlias "'clucene_core_2' has been renamed to 'clucene-core_2'" clucene-core_2; # Added 2026-01-12
  cmtk = throw "'cmtk' has been dropped due to being broken since September 2025, with no complaints by any users of the package."; # Added 2026-04-05
  coc-sumneko-lua = throw "'coc-sumneko-lua' has been removed due to unmaintained and broken package. 'lua_ls' can be used as a replacement"; # Added 2026-02-04
  cockroachdb-bin = throw "'cockroachdb-bin' has been renamed to/replaced by 'cockroachdb'"; # Converted to throw 2025-10-27
  code-browser-gtk2 = throw "'code-browser-gtk2' has been removed, as it was broken since 22.11"; # Added 2025-08-22