Unverified Commit 41d21a82 authored by Markus Kowalewski's avatar Markus Kowalewski Committed by GitHub
Browse files

Merge pull request #331723 from sheepforce/openbabel-fix 

openbabel: fix build errors with python 3.12
parents 284db721 35255195

pkgs/development/libraries/openbabel/default.nix

+28 −10
Original line number Diff line number Diff line 
{ stdenv, lib, fetchFromGitHub, cmake, perl, zlib, libxml2, eigen, python, cairo, pcre, pkg-config, swig, rapidjson }:

{ stdenv

, lib

, fetchFromGitHub

, cmake

, perl

, zlib

, libxml2

, eigen

, python

, cairo

, pcre

, pkg-config

, swig

, rapidjson

, boost

, maeparser

, coordgenlibs

}:



stdenv.mkDerivation rec {

  pname = "openbabel";
@@ -15,22 +32,23 @@ stdenv.mkDerivation rec { 
    sed '1i#include <ctime>' -i include/openbabel/obutil.h # gcc12

  '';



  buildInputs = [ perl zlib libxml2 eigen python cairo pcre swig rapidjson ];

  buildInputs = [ perl zlib libxml2 eigen python cairo pcre swig rapidjson boost maeparser coordgenlibs ];



  nativeBuildInputs = [ cmake pkg-config ];



  pythonMajorMinor = "${python.sourceVersion.major}.${python.sourceVersion.minor}";



  cmakeFlags = [

  preConfigure = ''

    cmakeFlagsArray+=(

      "-DRUN_SWIG=ON"

      "-DPYTHON_BINDINGS=ON"

  ];

      "-DPYTHON_INSTDIR=$out/${python.sitePackages}"

    )

  '';



  # Setuptools only accepts PEP 440 version strings. The "unstable" identifier

  # can not be used. Instead we pretend to be the 3.2 beta release.

  postFixup = ''

    cat <<EOF > $out/lib/python$pythonMajorMinor/site-packages/setup.py

    from distutils.core import setup

    cat << EOF > $out/${python.sitePackages}/setup.py

    from setuptools import setup



    setup(

        name = 'pyopenbabel',

pkgs/development/python-modules/openbabel-bindings/default.nix

+2 −2
Original line number Diff line number Diff line
@@ -8,9 +8,9 @@ 
buildPythonPackage rec {

  inherit (openbabel) pname version;



  src = "${openbabel}/lib/python${python.sourceVersion.major}.${python.sourceVersion.minor}/site-packages";

  src = "${openbabel}/${python.sitePackages}";



  nativeBuildInputs = [ openbabel ];

  buildInputs = [ openbabel ];



  # these env variables are used by the bindings to find libraries

  # they need to be included explicitly in your nix-shell for