Commit 3b988f71 authored by Gaetan Lepage's avatar Gaetan Lepage
Browse files

python312Packages.ome-zarr: fix

parent 815a35a1

pkgs/development/python-modules/ome-zarr/default.nix

+17 −10
Original line number Diff line number Diff line 
{

  lib,

  buildPythonPackage,

  pythonOlder,

  fetchFromGitHub,

  pytestCheckHook,



  # build-system

  setuptools,

  setuptools-scm,



  # dependencies

  aiohttp,

  dask,

  distributed,
@@ -11,9 +15,11 @@ 
  numpy,

  requests,

  scikit-image,

  setuptools,

  toolz,

  zarr,



  # tests

  pytestCheckHook,

}:



buildPythonPackage rec {
@@ -21,8 +27,6 @@ buildPythonPackage rec { 
  version = "0.10.3";

  pyproject = true;



  disabled = pythonOlder "3.9";



  src = fetchFromGitHub {

    owner = "ome";

    repo = "ome-zarr-py";
@@ -32,21 +36,24 @@ buildPythonPackage rec { 


  build-system = [

    setuptools

    setuptools-scm

  ];



  dependencies = [

    numpy

    aiohttp

    dask

    distributed

    zarr

    fsspec

    aiohttp

    numpy

    requests

    scikit-image

    toolz

    zarr

  ] ++ fsspec.optional-dependencies.s3;



  nativeCheckInputs = [ pytestCheckHook ];

  nativeCheckInputs = [

    pytestCheckHook

  ];



  disabledTests = [

    # attempts to access network
@@ -90,7 +97,7 @@ buildPythonPackage rec { 
  meta = {

    description = "Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud";

    homepage = "https://pypi.org/project/ome-zarr";

    changelog = "https://github.com/ome/ome-zarr-py/blob/${src.tag}/CHANGELOG.md";

    changelog = "https://github.com/ome/ome-zarr-py/blob/v${version}/CHANGELOG.md";

    license = lib.licenses.bsd2;

    maintainers = [ lib.maintainers.bcdarwin ];

    mainProgram = "ome_zarr";