python312Packages.biopandas: 0.5.0 -> 0.5.1 (#352141)

  numpy,

  pandas,

  pytestCheckHook,

  fetchpatch2,

}:

buildPythonPackage rec {

  pname = "biopandas";

  version = "0.5.0";

  version = "0.5.1";

  pyproject = true;

  src = fetchFromGitHub {

    owner = "BioPandas";

    repo = "biopandas";

    rev = "refs/tags/v${version}";

    hash = "sha256-1c78baBBsDyvAWrNx5mZI/Q75wyXv0DAwAdWm3EwX/I=";

    hash = "sha256-dUeGjDDz9VA1NrFLGKy0ebaa+MU4c1tHi5YYkAspLRk=";

  };

  patches = [

    # Needed for below patch to apply properly

    (fetchpatch2 {

      name = "deprecate-mmtf-parsing.patch";

      url = "https://github.com/BioPandas/biopandas/commit/7a1517dbe76f2c70da8edb35f90c9fa69254e726.patch?full_index=1";

      hash = "sha256-RFtXFqUYl8GnZ319HsBwx5SUbfUDnR66Ppakdvtg/wI=";

    })

    # Remove nose as a dependency.

    (fetchpatch2 {

      name = "remove-nose.patch";

      url = "https://github.com/BioPandas/biopandas/commit/67aa2f237c70c826cd9ab59d6ae114582da2112f.patch?full_index=1";

      hash = "sha256-fVl57/vGuzlYX/MBZnma1ZFCVmIpjr1k8t3bUJnb/uI=";

      excludes = [ "setup.py" ];

    })

  ];

  pythonRelaxDeps = [ "looseversion" ];

  build-system = [ setuptools ];