Unverified Commit 308ee09f authored by Ryan Lahfa's avatar Ryan Lahfa Committed by GitHub
Browse files

Merge pull request #231598 from natsukium/truvari/disable-tests-darwin 

truvari: disable some tests on darwin
parents cd2a1fad 7edb72db

pkgs/applications/science/biology/truvari/default.nix

+14 −0
Original line number Diff line number Diff line 
{ lib

, fetchFromGitHub

, fetchpatch

, python3Packages

, runtimeShell

, bcftools
@@ -24,6 +25,19 @@ in python3Packages.buildPythonApplication rec { 
    hash = "sha256-UJNMKEV5m2jFqnWvkVAtymkcE2TjPIXp7JqRZpMSqsE=";

  };



  patches = [

    (fetchpatch {

      name = "fix-anno-trf-on-darwin.patch";

      url = "https://github.com/ACEnglish/truvari/commit/f9f36305e8eaa88f951562210e3672a4d4f71265.patch";

      hash = "sha256-7O9jTQDCC2b8hUBm0qJQCYMzTC9NFtn/E0dTHSfJALU=";

    })

    (fetchpatch {

      name = "fix-anno-grm-on-darwin.patch";

      url = "https://github.com/ACEnglish/truvari/commit/31416552008a506204ed4e2add55474f10392357.patch";

      hash = "sha256-42u0ewZU38GCoSfff+XQFv9hEFeO3WlJufTHcl6vkN4=";

    })

  ];



  postPatch = ''

    substituteInPlace setup.py \

      --replace "rich==" "rich>="