Unverified Commit 2d073454 authored by Michael Hoang's avatar Michael Hoang Committed by GitHub
Browse files

splitcode: 0.31.5 -> 0.31.6 (#468664)

parents f170ff2b 564270ed

pkgs/by-name/sp/splitcode/package.nix

+4 −9
Original line number Diff line number Diff line
@@ -9,13 +9,13 @@ 
}:

stdenv.mkDerivation (finalAttrs: {

  pname = "splitcode";

  version = "0.31.5";

  version = "0.31.6";



  src = fetchFromGitHub {

    owner = "pachterlab";

    repo = "splitcode";

    tag = "v${finalAttrs.version}";

    hash = "sha256-x2N+IQHB6gbEKTEofsWy7SwVf1lvRxh5f93avtAs8fM=";

    hash = "sha256-80XrLr6gk398a/JVSpb8j0i2pMEDKn0EnTiSw7cWS2c=";

  };



  nativeBuildInputs = [ cmake ];
@@ -25,12 +25,6 @@ stdenv.mkDerivation (finalAttrs: { 
    zlib

  ];



  postPatch = ''

    # https://github.com/pachterlab/splitcode/pull/46

    substituteInPlace CMakeLists.txt \

      --replace-fail 2.8.12 3.10

  '';



  doCheck = true;

  checkPhase = ''

    mkdir func_tests
@@ -44,7 +38,8 @@ stdenv.mkDerivation (finalAttrs: { 
    description = "Tool for flexible, efficient parsing, interpreting, and editing of technical sequences in sequencing reads";

    homepage = "https://github.com/pachterlab/splitcode";

    license = lib.licenses.bsd2;

    platforms = lib.platforms.all;

    # also compiles on macos, but since it seems to return invalid results.

    platforms = lib.platforms.linux;

    maintainers = with lib.maintainers; [ zimward ];

    mainProgram = "splitcode";

    badPlatforms = [