python3Packages.gpytorch: fix build (#493846) (2adbe4cf) · Commits · nix / nixpkgs

pkgs/development/python-modules/botorch/default.nix

+6 −6

Original line number	Diff line number	Diff line
		@@ -27,16 +27,16 @@
		pythonAtLeast,
		}:

		buildPythonPackage rec {
		buildPythonPackage (finalAttrs: {
		pname = "botorch";
		version = "0.16.1";
		version = "0.17.0";
		pyproject = true;

		src = fetchFromGitHub {
		owner = "meta-pytorch";
		repo = "botorch";
		tag = "v${version}";
		hash = "sha256-8tmNw1Qa3lXxvndljRijGNN5RMjsYlT8zFFau23yp1U=";
		tag = "v${finalAttrs.version}";
		hash = "sha256-NDdXsmVdrTEXMXXVf89EkGXVOYnEcXwtzarB5niTNaw=";
		};

		build-system = [
		@@ -102,10 +102,10 @@ buildPythonPackage rec {
		requiredSystemFeatures = [ "big-parallel" ];

		meta = {
		changelog = "https://github.com/meta-pytorch/botorch/blob/${src.tag}/CHANGELOG.md";
		changelog = "https://github.com/meta-pytorch/botorch/blob/${finalAttrs.src.tag}/CHANGELOG.md";
		description = "Bayesian Optimization in PyTorch";
		homepage = "https://botorch.org";
		license = lib.licenses.mit;
		maintainers = with lib.maintainers; [ veprbl ];
		};
		}
		})

pkgs/development/python-modules/gpytorch/default.nix

+12 −4

Original line number	Diff line number	Diff line
		@@ -20,7 +20,7 @@
		pytestCheckHook,
		}:

		buildPythonPackage rec {
		buildPythonPackage (finalAttrs: {
		pname = "gpytorch";
		version = "1.15.1";
		pyproject = true;
		@@ -28,10 +28,18 @@ buildPythonPackage rec {
		src = fetchFromGitHub {
		owner = "cornellius-gp";
		repo = "gpytorch";
		tag = "v${version}";
		tag = "v${finalAttrs.version}";
		hash = "sha256-ftiAY02K0EwVQZufk8xR+/21A+2ONWchuWPF3a5lRW0=";
		};

		# AttributeError: module 'numpy' has no attribute 'trapz'
		postPatch = ''
		substituteInPlace gpytorch/kernels/spectral_mixture_kernel.py \
		--replace-fail \
		"np.trapz(emp_spect, freq)" \
		"np.trapezoid(emp_spect, freq)"
		'';

		build-system = [
		setuptools
		setuptools-scm
		@@ -73,8 +81,8 @@ buildPythonPackage rec {
		description = "Highly efficient and modular implementation of Gaussian Processes, with GPU acceleration";
		homepage = "https://gpytorch.ai";
		downloadPage = "https://github.com/cornellius-gp/gpytorch";
		changelog = "https://github.com/cornellius-gp/gpytorch/releases/tag/${src.tag}";
		changelog = "https://github.com/cornellius-gp/gpytorch/releases/tag/${finalAttrs.src.tag}";
		license = lib.licenses.mit;
		maintainers = with lib.maintainers; [ veprbl ];
		};
		}
		})

pkgs/development/python-modules/syne-tune/default.nix

+10 −22

Original line number	Diff line number	Diff line
		@@ -36,7 +36,7 @@
		ray,
		writableTmpDirAsHomeHook,
		}:
		buildPythonPackage rec {
		buildPythonPackage (finalAttrs: {
		pname = "syne-tune";
		version = "0.15.0";
		pyproject = true;
		@@ -44,17 +44,10 @@ buildPythonPackage rec {
		src = fetchFromGitHub {
		owner = "syne-tune";
		repo = "syne-tune";
		tag = "v${version}";
		tag = "v${finalAttrs.version}";
		hash = "sha256-UNBpfC+aLXhkbyvCG2K00yedJnpYpfldqisZ/wDPtuA=";
		};

		postPatch = ''
		substituteInPlace syne_tune/optimizer/schedulers/synchronous/hyperband.py \
		--replace-fail 'metric_val=np.NAN' 'metric_val=np.nan'
		substituteInPlace syne_tune/optimizer/schedulers/synchronous/dehb.py \
		--replace-fail 'result_failed.metric_val = np.NAN' 'result_failed.metric_val = np.nan'
		'';

		build-system = [
		setuptools
		];
		@@ -108,12 +101,12 @@ buildPythonPackage rec {
		writableTmpDirAsHomeHook
		]
		++ ray.optional-dependencies.tune
		++ optional-dependencies.blackbox-repository
		++ optional-dependencies.bore
		++ optional-dependencies.botorch
		++ optional-dependencies.gpsearchers
		++ optional-dependencies.kde
		++ optional-dependencies.sklearn;
		++ finalAttrs.passthru.optional-dependencies.blackbox-repository
		++ finalAttrs.passthru.optional-dependencies.bore
		++ finalAttrs.passthru.optional-dependencies.botorch
		++ finalAttrs.passthru.optional-dependencies.gpsearchers
		++ finalAttrs.passthru.optional-dependencies.kde
		++ finalAttrs.passthru.optional-dependencies.sklearn;

		disabledTests = [
		# NameError: name 'HV' is not defined
		@@ -129,11 +122,6 @@ buildPythonPackage rec {
		"test_cholesky_factorization"
		];

		disabledTestPaths = [
		# legacy test
		"tst/schedulers/test_legacy_schedulers_api.py"
		];

		pythonImportsCheck = [
		"syne_tune"
		];
		@@ -141,8 +129,8 @@ buildPythonPackage rec {
		meta = {
		description = "Large scale asynchronous hyperparameter and architecture optimization library";
		homepage = "https://github.com/syne-tune/syne-tune";
		changelog = "https://github.com/syne-tune/syne-tune/releases/tag/${src.tag}";
		changelog = "https://github.com/syne-tune/syne-tune/releases/tag/${finalAttrs.src.tag}";
		license = lib.licenses.asl20;
		maintainers = with lib.maintainers; [ daspk04 ];
		};
		}
		})