Commit 24030404 authored by Gaetan Lepage's avatar Gaetan Lepage
Browse files

python312Packages.mhcflurry: 2.1.4 -> 2.1.5 

Diff: https://github.com/openvax/mhcflurry/compare/refs/tags/v2.1.4...v2.1.5

Changelog: https://github.com/openvax/mhcflurry/releases/tag/v2.1.5
parent 1832c184

pkgs/development/python-modules/mhcflurry/default.nix

+4 −14
Original line number Diff line number Diff line
@@ -2,12 +2,12 @@ 
  lib,

  buildPythonPackage,

  fetchFromGitHub,

  fetchpatch,



  # dependencies

  appdirs,

  keras,

  mhcgnomes,

  numpy,

  pandas,

  pyyaml,

  scikit-learn,
@@ -21,30 +21,22 @@ 


buildPythonPackage rec {

  pname = "mhcflurry";

  version = "2.1.4";

  version = "2.1.5";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "openvax";

    repo = "mhcflurry";

    tag = "v${version}";

    hash = "sha256-dxCGCPnk1IFKg8ZVqMJsojQL0KlNirKlHJoaaOYIzMU=";

    hash = "sha256-TNb3oKZvgBuXoSwsTuEJjFKEVZyHynazuPInj7wVKs8=";

  };



  patches = [

    # TODO: this has been merged in master and will thus be included in the next release.

    (fetchpatch {

      name = "migrate-from-nose-to-pytest";

      url = "https://github.com/openvax/mhcflurry/commit/8e9f35381a476362ca41cb71eb0a90f6573fe4b3.patch";

      hash = "sha256-PyyxGrjE3OZR8dKHEQBQGiRG9A8kcz/e14PRyrVvqrE=";

    })

  ];



  # keras and tensorflow are not in the official setup.py requirements but are required for the CLI utilities to run.

  dependencies = [

    appdirs

    keras

    mhcgnomes

    numpy

    pandas

    pyyaml

    scikit-learn
@@ -53,8 +45,6 @@ buildPythonPackage rec { 
    tqdm

  ];



  # Tests currently depend on nose; see

  # <https://github.com/openvax/mhcflurry/pull/244>.

  nativeCheckInputs = [

    pytestCheckHook

  ];