Unverified Commit 10c3a406 authored by natsukium's avatar natsukium
Browse files

kssd: enable aarch64-linux support & tests

parent 847c506e

pkgs/applications/science/biology/kssd/default.nix

+12 −1
Original line number Diff line number Diff line
@@ -3,6 +3,8 @@ 
, fetchFromGitHub

, fetchpatch

, zlib

, kssd

, runCommand

}:



stdenv.mkDerivation (finalAttrs: {
@@ -35,12 +37,21 @@ stdenv.mkDerivation (finalAttrs: { 
    runHook postInstall

  '';



  passthru.tests = {

    simple = runCommand "${finalAttrs.pname}-test" { } ''

      mkdir $out

      ${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -r ${kssd.src}/test_fna/seqs1 -o $out/reference

      ${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -o $out/query ${kssd.src}/test_fna/seqs2

      ${lib.getExe kssd} dist -r $out/reference -o $out/distout $out/query

    '';

  };



  meta = with lib; {

    description = "K-mer substring space decomposition";

    license     = licenses.asl20;

    homepage    = "https://github.com/yhg926/public_kssd";

    maintainers = with maintainers; [ unode ];

    platforms = [ "x86_64-linux" ];

    platforms = platforms.linux;

    mainProgram = "kssd";

  };

})