Commit 0eacecad authored by Ben Darwin's avatar Ben Darwin
Browse files

python312Packages.hyppo: unbreak 

Disabled doctests which seem not properly maintained/tested; disabled
test collection of non-source directories (e.g. 'tutorials' contains
some broken code, but no actual tests)
parent 1777f064

pkgs/development/python-modules/hyppo/default.nix

+13 −5
Original line number Diff line number Diff line
@@ -3,6 +3,7 @@ 
  buildPythonPackage,

  pythonOlder,

  fetchFromGitHub,

  setuptools,

  pytestCheckHook,

  autograd,

  numba,
@@ -16,7 +17,7 @@ 
buildPythonPackage rec {

  pname = "hyppo";

  version = "0.4.0";

  format = "setuptools";

  pyproject = true;



  disabled = pythonOlder "3.6";
@@ -27,6 +28,14 @@ buildPythonPackage rec { 
    hash = "sha256-QRE3oSxTEobTQ/7DzCAUOdjzIZmWUn9bgPmJWj6JuZg=";

  };



  # some of the doctests (4/21) are broken, e.g. unbound variables, nondeterministic with insufficient tolerance, etc.

  # (note upstream's .circleci/config.yml only tests test_*.py files despite their pytest.ini adding --doctest-modules)

  postPatch = ''

    substituteInPlace pytest.ini --replace-fail "addopts = --doctest-modules" ""

  '';



  build-system = [ setuptools ];



  propagatedBuildInputs = [

    autograd

    numba
@@ -40,15 +49,14 @@ buildPythonPackage rec { 
    matplotlib

    seaborn

  ];

  disabledTestPaths = [

    "docs"

    "benchmarks"

    "examples"

  pytestFlagsArray = [

    "hyppo"

  ];



  meta = with lib; {

    homepage = "https://github.com/neurodata/hyppo";

    description = "Python package for multivariate hypothesis testing";

    changelog = "https://github.com/neurodata/hyppo/releases/tag/v${version}";

    license = licenses.mit;

    maintainers = with maintainers; [ bcdarwin ];

  };