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doc: replace references to `--replace` for the `substitute` command
The `--replace` argument for `substitute` and `substituteInPlace` was deprecated in e07a2fab. Updating all references in the nixpkgs manual to use `--replace-fail`.
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The `--replace` argument for `substitute` and `substituteInPlace` was deprecated in e07a2fab. Updating all references in the nixpkgs manual to use `--replace-fail`.