From 44a51565952f7d4f091ea3d35da36456830b11ef Mon Sep 17 00:00:00 2001
From: John Chilton <jmchilton@gmail.com>
Date: Sun, 8 Mar 2015 12:29:51 -0400
Subject: [PATCH] Updates to hacky update_galaxy_utils.sh script.
---
update_galaxy_utils.sh | 13 +++++++++++++
1 file changed, 13 insertions(+)
diff --git a/update_galaxy_utils.sh b/update_galaxy_utils.sh
index d0efabde..53723cd8 100755
--- a/update_galaxy_utils.sh
+++ b/update_galaxy_utils.sh
@@ -51,6 +51,13 @@ then
rm -rf $GALAXY_LIB_DIR/jobs/metrics
cp -r $PULSAR_DIRECTORY/galaxy/jobs/metrics $GALAXY_LIB_DIR/jobs
+ rm -rf $GALAXY_LIB_DIR/tools/linters
+ cp -r $PULSAR_DIRECTORY/galaxy/tools/linters $GALAXY_LIB_DIR/tools
+
+ cp $PULSAR_DIRECTORY/galaxy/tools/lint.py $GALAXY_LIB_DIR/tools/lint.py
+ cp $PULSAR_DIRECTORY/galaxy/tools/loader.py $GALAXY_LIB_DIR/tools/loader.py
+ cp $PULSAR_DIRECTORY/galaxy/tools/loader_directory.py $GALAXY_LIB_DIR/tools/loader_directory.py
+
cp $PULSAR_DIRECTORY/galaxy/util/plugin_config.py $GALAXY_LIB_DIR/util
else
@@ -66,6 +73,12 @@ else
rm -rf $PULSAR_DIRECTORY/galaxy/jobs/metrics
cp -r $GALAXY_LIB_DIR/jobs/metrics $PULSAR_DIRECTORY/galaxy/jobs
+ rm -rf $PULSAR_DIRECTORY/galaxy/tools/linters
+ cp -r $GALAXY_LIB_DIR/tools/linters $PULSAR_DIRECTORY/galaxy/tools
+
+ cp $GALAXY_LIB_DIR/tools/lint.py $PULSAR_DIRECTORY/galaxy/tools
+ cp $GALAXY_LIB_DIR/tools/loader.py $PULSAR_DIRECTORY/galaxy/tools
+ cp $GALAXY_LIB_DIR/tools/loader_directory.py $PULSAR_DIRECTORY/galaxy/tools
cp $GALAXY_LIB_DIR/util/plugin_config.py $PULSAR_DIRECTORY/galaxy/util/
fi
--
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