Loading test/functional/tools/discover_default_ext.xml 0 → 100644 +52 −0 Original line number Diff line number Diff line <tool id="discover_default_ext" name="discover_default_ext" version="0.1.0"> <command><![CDATA[ echo 1 > 1.txt; ]]></command> <inputs /> <outputs> <collection name="collection_with_default_ext" type="list" label="with default format" format="fasta"> <discover_datasets pattern="__name_and_ext__" /> </collection> <collection name="collection_default_ext_and_explicit_format" type="list" label="with default format and static element format" format="fasta"> <discover_datasets pattern="__name__" format="txt" /> </collection> <collection name="collection_default_ext_used" type="list" label="with default format and no override" format="fasta"> <discover_datasets pattern="__name__" /> </collection> <collection name="collection_without_default_ext" type="list" label="wihtout default ext, should be data"> <discover_datasets pattern="__name__" /> </collection> </outputs> <tests> <test expect_num_outputs="4"> <output_collection name="collection_with_default_ext" type="list" count="1"> <element name="1" ftype="txt"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_default_ext_and_explicit_format" type="list" count="1"> <element name="1.txt" ftype="txt"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_default_ext_used" type="list" count="1"> <element name="1.txt" ftype="fasta"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_without_default_ext" type="list" count="1"> <element name="1.txt" ftype="data"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> </test> </tests> </tool> test/functional/tools/sample_tool_conf.xml +1 −0 Original line number Diff line number Diff line Loading @@ -206,6 +206,7 @@ <tool file="collection_cat_group_tag.xml" /> <tool file="collection_cat_group_tag_multiple.xml" /> <tool file="discover_sort_by.xml" /> <tool file="discover_default_ext.xml" /> <tool file="expression_forty_two.xml" /> <tool file="expression_pick_larger_file.xml" /> <tool file="expression_parse_int.xml" /> Loading Loading
test/functional/tools/discover_default_ext.xml 0 → 100644 +52 −0 Original line number Diff line number Diff line <tool id="discover_default_ext" name="discover_default_ext" version="0.1.0"> <command><![CDATA[ echo 1 > 1.txt; ]]></command> <inputs /> <outputs> <collection name="collection_with_default_ext" type="list" label="with default format" format="fasta"> <discover_datasets pattern="__name_and_ext__" /> </collection> <collection name="collection_default_ext_and_explicit_format" type="list" label="with default format and static element format" format="fasta"> <discover_datasets pattern="__name__" format="txt" /> </collection> <collection name="collection_default_ext_used" type="list" label="with default format and no override" format="fasta"> <discover_datasets pattern="__name__" /> </collection> <collection name="collection_without_default_ext" type="list" label="wihtout default ext, should be data"> <discover_datasets pattern="__name__" /> </collection> </outputs> <tests> <test expect_num_outputs="4"> <output_collection name="collection_with_default_ext" type="list" count="1"> <element name="1" ftype="txt"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_default_ext_and_explicit_format" type="list" count="1"> <element name="1.txt" ftype="txt"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_default_ext_used" type="list" count="1"> <element name="1.txt" ftype="fasta"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> <output_collection name="collection_without_default_ext" type="list" count="1"> <element name="1.txt" ftype="data"> <assert_contents> <has_text text="1" /> </assert_contents> </element> </output_collection> </test> </tests> </tool>
test/functional/tools/sample_tool_conf.xml +1 −0 Original line number Diff line number Diff line Loading @@ -206,6 +206,7 @@ <tool file="collection_cat_group_tag.xml" /> <tool file="collection_cat_group_tag_multiple.xml" /> <tool file="discover_sort_by.xml" /> <tool file="discover_default_ext.xml" /> <tool file="expression_forty_two.xml" /> <tool file="expression_pick_larger_file.xml" /> <tool file="expression_parse_int.xml" /> Loading