Unverified Commit 979ae54b authored by Aysam Guerler's avatar Aysam Guerler Committed by GitHub
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Merge pull request #20907 from guerler/add_alignmentviewer 

Add Multiple Sequence Alignment Viewer 2.0
parents 2d513e83 e5d48907

client/visualizations.yml

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@@ -12,6 +12,9 @@ aladin: 
alignment:

    package: "@galaxyproject/alignment"

    version: 0.0.9

alignmentviewer:

    package: "@galaxyproject/alignmentviewer"

    version: 0.0.3

annotateimage:

    package: "@galaxyproject/annotateimage"

    version: 0.0.0

lib/galaxy/config/sample/datatypes_conf.xml.sample

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@@ -12,6 +12,7 @@ 
    <datatype extension="hep.root" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true" description="ROOT binary file."/>

    <datatype extension="jp2" type="galaxy.datatypes.binary:JP2" mimetype="application/octet-stream" display_in_upload="true"/>

    <datatype extension="ab1" type="galaxy.datatypes.binary:Ab1" mimetype="application/octet-stream" display_in_upload="true" description="A binary sequence file in 'ab1' format with a '.ab1' file extension.  You must manually select this 'File Format' when uploading the file." description_url="https://wiki.galaxyproject.org/Learn/Datatypes#Ab1"/>

    <datatype extension="a2m" type="galaxy.datatypes.sequence:Fasta" display_in_upload="true" description="A multiple sequence alignment in A2M format. Each sequence has a single-line description starting with '>', followed by aligned sequence lines. Dots ('.') represent matches to a reference, and hyphens ('-') represent deletions relative to the reference." subclass="true" />

    <datatype extension="afg" type="galaxy.datatypes.assembly:Amos" display_in_upload="false"/>

    <datatype extension="agp" type="galaxy.datatypes.goldenpath:GoldenPath" display_in_upload="true" description="UCSC GoldenPath assembly"/>

    <datatype extension="anvio_cog_profile" type="galaxy.datatypes.anvio:AnvioComposite" display_in_upload="false" subclass="true" />