Unverified Commit 889ff345 authored by mvdbeek's avatar mvdbeek
Browse files

Improve relabel from file error if bale file doesn't contain enough lines

parent 9a61e3ce

lib/galaxy/tools/__init__.py

+4 −0
Original line number Diff line number Diff line
@@ -3872,6 +3872,10 @@ class RelabelFromFileTool(DatabaseOperationTool): 
                add_copied_value_to_new_elements(new_label, dce_object)

        else:

            # If new_labels_dataset_assoc is not a two-column tabular dataset we label with the current line of the dataset

            if hdca.collection.element_count > len(new_labels):

                raise exceptions.MessageException(

                    "Relabel mapping file contains less lines than there are collection elements to relabel."

                )

            for i, dce in enumerate(hdca.collection.elements):

                dce_object = dce.element_object

                add_copied_value_to_new_elements(new_labels[i], dce_object)