Loading lib/galaxy/config/sample/job_conf.xml.sample_advanced +5 −5 Original line number Diff line number Diff line Loading @@ -588,13 +588,13 @@ trust tool's specified container - a destination wide override can be set. This will cause all jobs on this destination to use that docker image. --> <!-- <param id="docker_container_id_override">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_container_id_override">busybox:1.36.1-glibc</param> --> <!-- Likewise, if deployer wants to use docker for isolation and does trust tool's specified container - but also wants tool's not configured to run in a container the following option can provide a fallback. --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc</param> --> <!-- If the destination should be secured to only allow containerized jobs the following parameter may be set for the job destination. Some tools do Loading Loading @@ -674,11 +674,11 @@ the enabled container types for this destination will be used. --> <param id="container_override"> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc'</container> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc</container> <container type="singularity" shell="/bin/sh" resolve_dependencies="false">/path/to/default/container</container> </param> <param id="container"> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc'</container> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc</container> <container type="singularity" shell="/bin/sh" resolve_dependencies="false">/path/to/default/container</container> </param> </destination> Loading Loading @@ -966,7 +966,7 @@ container ID will be passed along to condor as the docker_image submission parameter. --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc</param> --> </destination> <!-- Jobs can be re-submitted for various reasons (to the same destination or others, Loading Loading
lib/galaxy/config/sample/job_conf.xml.sample_advanced +5 −5 Original line number Diff line number Diff line Loading @@ -588,13 +588,13 @@ trust tool's specified container - a destination wide override can be set. This will cause all jobs on this destination to use that docker image. --> <!-- <param id="docker_container_id_override">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_container_id_override">busybox:1.36.1-glibc</param> --> <!-- Likewise, if deployer wants to use docker for isolation and does trust tool's specified container - but also wants tool's not configured to run in a container the following option can provide a fallback. --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc</param> --> <!-- If the destination should be secured to only allow containerized jobs the following parameter may be set for the job destination. Some tools do Loading Loading @@ -674,11 +674,11 @@ the enabled container types for this destination will be used. --> <param id="container_override"> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc'</container> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc</container> <container type="singularity" shell="/bin/sh" resolve_dependencies="false">/path/to/default/container</container> </param> <param id="container"> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc'</container> <container type="docker" shell="/bin/sh" resolve_dependencies="false">busybox:1.36.1-glibc</container> <container type="singularity" shell="/bin/sh" resolve_dependencies="false">/path/to/default/container</container> </param> </destination> Loading Loading @@ -966,7 +966,7 @@ container ID will be passed along to condor as the docker_image submission parameter. --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc'</param> --> <!-- <param id="docker_default_container_id">busybox:1.36.1-glibc</param> --> </destination> <!-- Jobs can be re-submitted for various reasons (to the same destination or others, Loading