Loading test/functional/tools/multi_output_recurse_collection.xml 0 → 100644 +57 −0 Original line number Diff line number Diff line <!--essentially the same as multi_output_recurse_collection, but: - test collection and generated order in the collection --> <tool id="multi_output_recurse_collection" name="multi_output_recurse_collection" version="0.1.0" profile="22.01"> <macros> <xml name="outelem" tokens="number" token_path=""> <element name="@PATH@@NUMBER@" ftype="txt"> <assert_contents> <has_text text="@NUMBER@"/> </assert_contents> </element> </xml> </macros> <command><![CDATA[ mkdir 1; echo "3" > 1/3.txt; echo "4" > 1/4.txt; mkdir 2; echo "1" > 2/1.txt; echo "2" > 2/2.txt; mkdir 3; echo "5" > 3/5.txt; mkdir 3/1; echo "0" > 3/1/0.txt; ]]></command> <inputs> <param type="boolean" name="match_relative"/> </inputs> <outputs> <collection type="list" name="output"> <discover_datasets directory="./" recurse="true" pattern="__designation_and_ext__"/> </collection> <collection type="list" name="output_relative"> <discover_datasets directory="./" recurse="true" pattern="__designation_and_ext__" match_relative_path="true"/> </collection> </outputs> <tests> <test> <output_collection name="output" count="6"> <expand macro="outelem" number="0"/> <expand macro="outelem" number="1"/> <expand macro="outelem" number="2"/> <expand macro="outelem" number="3"/> <expand macro="outelem" number="4"/> <expand macro="outelem" number="5"/> </output_collection> <output_collection name="output_relative" count="6"> <expand macro="outelem" path="1/" number="3"/> <expand macro="outelem" path="1/" number="4"/> <expand macro="outelem" path="2/" number="1"/> <expand macro="outelem" path="2/" number="2"/> <expand macro="outelem" path="3/" number="5"/> <expand macro="outelem" path="3/1/" number="0"/> </output_collection> </test> </tests> </tool> test/functional/tools/samples_tool_conf.xml +1 −0 Original line number Diff line number Diff line Loading @@ -28,6 +28,7 @@ <tool file="multi_output_assign_primary.xml" /> <tool file="multi_output_assign_primary_ext_dbkey.xml" /> <tool file="multi_output_recurse.xml" /> <tool file="multi_output_recurse_collection.xml" /> <tool file="tool_provided_metadata_1.xml" /> <tool file="tool_provided_metadata_2.xml" /> <tool file="tool_provided_metadata_3.xml" /> Loading Loading
test/functional/tools/multi_output_recurse_collection.xml 0 → 100644 +57 −0 Original line number Diff line number Diff line <!--essentially the same as multi_output_recurse_collection, but: - test collection and generated order in the collection --> <tool id="multi_output_recurse_collection" name="multi_output_recurse_collection" version="0.1.0" profile="22.01"> <macros> <xml name="outelem" tokens="number" token_path=""> <element name="@PATH@@NUMBER@" ftype="txt"> <assert_contents> <has_text text="@NUMBER@"/> </assert_contents> </element> </xml> </macros> <command><![CDATA[ mkdir 1; echo "3" > 1/3.txt; echo "4" > 1/4.txt; mkdir 2; echo "1" > 2/1.txt; echo "2" > 2/2.txt; mkdir 3; echo "5" > 3/5.txt; mkdir 3/1; echo "0" > 3/1/0.txt; ]]></command> <inputs> <param type="boolean" name="match_relative"/> </inputs> <outputs> <collection type="list" name="output"> <discover_datasets directory="./" recurse="true" pattern="__designation_and_ext__"/> </collection> <collection type="list" name="output_relative"> <discover_datasets directory="./" recurse="true" pattern="__designation_and_ext__" match_relative_path="true"/> </collection> </outputs> <tests> <test> <output_collection name="output" count="6"> <expand macro="outelem" number="0"/> <expand macro="outelem" number="1"/> <expand macro="outelem" number="2"/> <expand macro="outelem" number="3"/> <expand macro="outelem" number="4"/> <expand macro="outelem" number="5"/> </output_collection> <output_collection name="output_relative" count="6"> <expand macro="outelem" path="1/" number="3"/> <expand macro="outelem" path="1/" number="4"/> <expand macro="outelem" path="2/" number="1"/> <expand macro="outelem" path="2/" number="2"/> <expand macro="outelem" path="3/" number="5"/> <expand macro="outelem" path="3/1/" number="0"/> </output_collection> </test> </tests> </tool>
test/functional/tools/samples_tool_conf.xml +1 −0 Original line number Diff line number Diff line Loading @@ -28,6 +28,7 @@ <tool file="multi_output_assign_primary.xml" /> <tool file="multi_output_assign_primary_ext_dbkey.xml" /> <tool file="multi_output_recurse.xml" /> <tool file="multi_output_recurse_collection.xml" /> <tool file="tool_provided_metadata_1.xml" /> <tool file="tool_provided_metadata_2.xml" /> <tool file="tool_provided_metadata_3.xml" /> Loading