Commit 38b11075 authored by Ahmed Awan's avatar Ahmed Awan
Browse files

[23.0] Fix History contents `genome_build` filter postgresql bug 

Check the user's db connection and use appropriate query/function.
parent f9be1a43

lib/galaxy/managers/genomes.py

+9 −2
Original line number Diff line number Diff line
@@ -4,7 +4,10 @@ from typing import ( 
    TYPE_CHECKING,

)



from sqlalchemy import func

from sqlalchemy import (

    func,

    text,

)



from galaxy import model as m

from galaxy.exceptions import (
@@ -86,6 +89,10 @@ class GenomeFilterMixin: 
            # Doesn't filter genome_build for collections

            if model_class.__name__ == "HistoryDatasetCollectionAssociation":

                return False

            # TODO: should use is_postgres(self.app.config.database_connection) in 23.2

            if self.app.config.database_connection.startswith("postgres"):

                column = text("convert_from(metadata, 'UTF8')::json ->> 'dbkey'")

            else:

                column = func.json_extract(model_class.table.c._metadata, "$.dbkey")

            lower_val = val.lower()  # Ignore case

            if op == "eq":