Fix validation of nested element fetch data payloads (22f761aa) · Commits · NDIP / Galaxy

lib/galaxy/schema/fetch_data.py

+1 −1

Original line number	Diff line number	Diff line
		@@ -187,7 +187,7 @@ CompositeDataElement.update_forward_refs()


		class NestedElement(BaseDataElement):
		items: List["AnyElement"] = Field(..., alias="elements")
		items: List[Union["AnyElement", "NestedElement"]] = Field(..., alias="elements")


		AnyElement = Annotated[

+45 −0

Original line number	Diff line number	Diff line
		@@ -81,6 +81,47 @@ recursive_archive_payload = {
		}


		nested_element_regression_payload = {
		"history_id": "80a1fcbe9fcb3c61",
		"targets": [
		{
		"destination": {"type": "hdca"},
		"elements": [
		{
		"name": "a",
		"elements": [
		{
		"name": "a",
		"elements": [
		{
		"url": "https://example.com",
		"src": "url",
		"dbkey": "?",
		"ext": "auto",
		"name": "forward",
		},
		{
		"url": "https://example.com",
		"src": "url",
		"dbkey": "?",
		"ext": "auto",
		"name": "reverse",
		},
		],
		"collection_type": "paired",
		},
		],
		"collection_type": "list:paired",
		},
		],
		"collection_type": "list:list:paired",
		"name": "a",
		}
		],
		"auto_decompress": True,
		}


		def test_fetch_data_schema():
		payload = FetchDataPayload(**example_payload)
		elements = payload.targets[0].items # type: ignore[union-attr] # alias doesn't type check properly
		@@ -113,3 +154,7 @@ def test_recursive_archive_form_like_data():
		payload = deepcopy(recursive_archive_payload)
		payload["targets"] = dumps(payload["targets"])
		FetchDataPayload(**payload)


		def test_nested_elemet_regression():
		FetchDataPayload(**nested_element_regression_payload)