Unverified Commit d1795cda authored by OTABI Tomoya's avatar OTABI Tomoya Committed by GitHub
Browse files

Merge pull request #325268 from natsukium/graspologic/fix 

python312Packages.graspologic: fix build; python312Packages.graspologic-native: init at 1.2.1
parents 82cc19f0 d21eddf3

pkgs/development/python-modules/graspologic-native/Cargo.lock

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checksum = "24d5b23dc417412679681396f2b49f3de8c1473deb516bd34410872eff51ed0d"



[[package]]

name = "windows_x86_64_msvc"

version = "0.52.6"

source = "registry+https://github.com/rust-lang/crates.io-index"

checksum = "589f6da84c646204747d1270a2a5661ea66ed1cced2631d546fdfb155959f9ec"

pkgs/development/python-modules/graspologic-native/default.nix

0 → 100644
+50 −0
Original line number Diff line number Diff line 
{

  lib,

  buildPythonPackage,

  fetchFromGitHub,

  rustPlatform,

  libiconv,

  pytestCheckHook,

}:



buildPythonPackage rec {

  pname = "graspologic-native";

  version = "1.2.1";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "graspologic-org";

    repo = "graspologic-native";

    rev = "refs/tags/${version}";

    hash = "sha256-fgiBUzYBerYX59uj+I0Yret94vA+FpQK+MckskCBqj4=";

  };



  cargoDeps = rustPlatform.importCargoLock { lockFile = ./Cargo.lock; };



  postPatch = ''

    ln -s ${./Cargo.lock} Cargo.lock

  '';



  buildAndTestSubdir = "packages/pyo3";



  nativeBuildInputs = [ rustPlatform.cargoSetupHook ];



  buildInputs = [ libiconv ];



  build-system = [ rustPlatform.maturinBuildHook ];



  pythonImportsCheck = [ "graspologic_native" ];



  nativeCheckInputs = [ pytestCheckHook ];



  preCheck = ''

    cd packages/pyo3

  '';



  meta = with lib; {

    description = "Library of rust components to add additional capability to graspologic a python library for intelligently building networks and network embeddings, and for analyzing connected data";

    homepage = "https://github.com/graspologic-org/graspologic-native";

    license = licenses.mit;

    maintainers = with maintainers; [ natsukium ];

  };

}

pkgs/development/python-modules/graspologic/default.nix

+41 −13
Original line number Diff line number Diff line 
{

  lib,

  stdenv,

  buildPythonPackage,

  isPy27,

  fetchFromGitHub,

  setuptools,

  poetry-core,

  poetry-dynamic-versioning,

  pytestCheckHook,

  pytest-cov,

  testfixtures,

  anytree,

  beartype,

  gensim,

  graspologic-native,

  hyppo,

  joblib,

  matplotlib,

  networkx,

  numpy,

  pot,

  scikit-learn,

  scipy,

  seaborn,

  statsmodels,

  typing-extensions,

  umap-learn,

}:



buildPythonPackage rec {
@@ -20,30 +30,44 @@ buildPythonPackage rec { 
  version = "3.4.1";

  pyproject = true;



  disabled = isPy27;



  src = fetchFromGitHub {

    owner = "microsoft";

    owner = "graspologic-org";

    repo = "graspologic";

    rev = "refs/tags/v${version}";

    hash = "sha256-taX/4/uCQXW7yFykVHY78hJIGThEIycHwrEOZ3h1LPY=";

  };



  nativeBuildInputs = [ setuptools ];

  build-system = [

    poetry-core

    poetry-dynamic-versioning

  ];



  pythonRelaxDeps = [ "scipy" ];



  propagatedBuildInputs = [

  dependencies = [

    anytree

    beartype

    gensim

    graspologic-native

    hyppo

    joblib

    matplotlib

    networkx

    numpy

    pot

    scikit-learn

    scipy

    seaborn

    statsmodels

    typing-extensions

    umap-learn

  ];



  env.NUMBA_CACHE_DIR = "$TMPDIR";



  nativeCheckInputs = [

    pytestCheckHook

    pytest-cov

    testfixtures

  ];

  pytestFlagsArray = [

    "tests"
@@ -52,12 +76,16 @@ buildPythonPackage rec { 
  ];

  disabledTests = [ "gridplot_outputs" ];



  disabledTestPaths = lib.optionals stdenv.hostPlatform.isDarwin [

    # SIGABRT

    "tests/test_plot.py"

    "tests/test_plot_matrix.py"

  ];



  meta = with lib; {

    homepage = "https://graspologic.readthedocs.io";

    homepage = "https://graspologic-org.github.io/graspologic";

    description = "Package for graph statistical algorithms";

    license = licenses.asl20; # changing to `licenses.mit` in next release

    license = licenses.mit;

    maintainers = with maintainers; [ bcdarwin ];

    # graspologic-native is not available

    broken = true;

  };

}

pkgs/top-level/python-packages.nix

+2 −0
Original line number Diff line number Diff line
@@ -5219,6 +5219,8 @@ self: super: with self; { 














  graspologic = callPackage ../development/python-modules/graspologic { };



























  graspologic-native = callPackage ../development/python-modules/graspologic-native { };



























  greatfet = callPackage ../development/python-modules/greatfet { };





























  greeclimate = callPackage ../development/python-modules/greeclimate { };