from __future__ import (absolute_import, division, print_function) import os import mantid.simpleapi as mantid import isis_powder.routines.common as common from isis_powder.routines import yaml_parser, InstrumentSettings from isis_powder.abstract_inst import AbstractInst from isis_powder.polaris_routines import polaris_advanced_config, polaris_algs, polaris_output, polaris_param_mapping class Polaris(AbstractInst): def __init__(self, **kwargs): basic_config_dict = yaml_parser.open_yaml_file_as_dictionary(kwargs.get("config_file", None)) self._inst_settings = InstrumentSettings.InstrumentSettings( attr_mapping=polaris_param_mapping.attr_mapping, adv_conf_dict=polaris_advanced_config.variables, basic_conf_dict=basic_config_dict, kwargs=kwargs) super(Polaris, self).__init__(user_name=self._inst_settings.user_name, calibration_dir=self._inst_settings.calibration_dir, output_dir=self._inst_settings.output_dir) # Hold the last dictionary later to avoid us having to keep parsing the YAML self._run_details_last_run_number = None self._run_details_cached_obj = None self._ads_workaround = 0 def focus(self, **kwargs): self._inst_settings.update_attributes(kwargs=kwargs) return self._focus(run_number=self._inst_settings.run_number, input_batching=self._inst_settings.input_mode, do_van_normalisation=self._inst_settings.do_van_normalisation) def create_calibration_vanadium(self, **kwargs): self._inst_settings.update_attributes(kwargs=kwargs) run_details = self.get_run_details(run_number_string=int(self._inst_settings.run_in_range)) run_details.run_number = run_details.vanadium_run_numbers return self._create_calibration_vanadium( vanadium_runs=run_details.vanadium_run_numbers, empty_runs=run_details.empty_runs, do_absorb_corrections=self._inst_settings.do_absorb_corrections, gen_absorb_correction=None) # TODO POLARIS doesn't need this flag to gen abs. corrections does PEARL? def get_run_details(self, run_number_string): input_run_number_list = common.generate_run_numbers(run_number_string=run_number_string) first_run = input_run_number_list[0] if self._run_details_last_run_number == first_run: return self._run_details_cached_obj run_details = polaris_algs.get_run_details(run_number=first_run, inst_settings=self._inst_settings) # Hold obj in case same run range is requested self._run_details_last_run_number = first_run self._run_details_cached_obj = run_details return run_details @staticmethod def generate_input_file_name(run_number): if isinstance(run_number, list): updated_list = ["POL" + str(val) for val in run_number] return updated_list else: return "POL" + str(run_number) def generate_output_file_name(self, run_number_string): return self.generate_input_file_name(run_number=run_number_string) @staticmethod def can_auto_gen_vanadium_cal(): return True def normalise_ws_current(self, ws_to_correct, run_details=None): normalised_ws = mantid.NormaliseByCurrent(InputWorkspace=ws_to_correct, OutputWorkspace=ws_to_correct) return normalised_ws def spline_vanadium_ws(self, focused_vanadium_spectra, instrument_version=''): masking_file_name = self._inst_settings.masking_file_name spline_coeff = self._inst_settings.spline_coeff masking_file_path = os.path.join(self.calibration_dir, masking_file_name) output = polaris_algs.process_vanadium_for_focusing(bank_spectra=focused_vanadium_spectra, spline_number=spline_coeff, mask_path=masking_file_path) return output def apply_absorb_corrections(self, run_details, van_ws, gen_absorb=False): return polaris_algs.calculate_absorb_corrections(ws_to_correct=van_ws) def output_focused_ws(self, processed_spectra, run_details, output_mode=None): d_spacing_group, tof_group = polaris_algs.split_into_tof_d_spacing_groups(run_details=run_details, processed_spectra=processed_spectra) output_paths = self.generate_out_file_paths(run_details=run_details) polaris_output.save_polaris_focused_data(d_spacing_group=d_spacing_group, tof_group=tof_group, output_paths=output_paths, run_number=run_details.run_number) return d_spacing_group def crop_raw_to_expected_tof_range(self, ws_to_crop): cropped_ws = common.crop_in_tof(ws_to_crop=ws_to_crop, x_min=self._inst_settings.raw_data_crop_values[0], x_max=self._inst_settings.raw_data_crop_values[1]) return cropped_ws def crop_van_to_expected_tof_range(self, van_ws_to_crop): cropped_ws = common.crop_in_tof(ws_to_crop=van_ws_to_crop, x_min=self._inst_settings.van_crop_values[0], x_max=self._inst_settings.van_crop_values[-1]) return cropped_ws def crop_banks_to_user_tof(self, focused_banks): return common.crop_banks_in_tof(focused_banks, self._inst_settings.tof_cropping_values) def generate_auto_vanadium_calibration(self, run_details): self.create_calibration_vanadium(run_in_range=run_details.run_number)