Added a new column. Also fixed a bug. Updated run info to explicitly state DAQ periods. Added checks for missing data

Updated the loadmuonnexus1 loader to read period information. Created a new widget for the period information. Need to deal with what happens when information cannot be found

Giovanni Di Siena authored Mar 31, 2020 and Gigg, Martyn Anthony committed Apr 07, 2020

In places other substitutions have been made, e.g
Clang does not yet specialize std::shared_ptr for T[]. Vector
has been used instead. The operator[] methods were incorrectly
marked const but returning a non-const reference - this has been fixed.
Refs #25842

Runs clang-tidy pass by ref across the codebase to fix-up various
warnings we are seeing in cppcheck

Also updated class_maker.py

Update copyright headers in all files

Squashed commit of the following:

* First version of a script to manage copyright statements

re #23468

* Neatened up script, added comments

re #23488

* move script to tools directory

re #23488

* small script changes and a couple of manual file changes

re #23488

* Minor chnage to whitespace detection in regex

re #23488

* Add an excluded directory

re #23488

* remove a repeasted copyright statement in a file

re #23488

* Don't comsume the comment end if it is on the same line

re #23488

* fix error in new copright parsing

re #23488

* remove double copyrifght entry

re #23488

* Improve handling of old copyrights at the start of comments

re #23488

* remove empty comments re #23488

* exclude gsoapgenerated directories

re #23488

* Sort out greedy line matching re #23488

* improve empty comment removal

re #23488

* improve false positives

re #23488

* impressive speedup by limiting regex matching length

re #23488

* remove evil invisible non ascii character

Also upadte the copyright at the same time

re #23488

* resolve multiple copyrights in a single file

re #23488

* resolve an issue with new statement detection

re #23488

* another unprintable unicode character

re #23488

* pep updates and cmake the new copyright fit clang format

re #23488

* update already done new format headers

re #23488

* wrong type of bracket

re #23488

* Update class_maker and friends

re #23488

* Update all copyright statements

re #23488

* clang format re #23488

* flake8 warnings re #23488

* Flake8 warnings re #23488

* Exclude .cmake.in and rb.in files

re #23488

* replace missing line re #23488

* exclude .py.in files as they are flasely recognized as C++

re #23488

* another setp.py.in re #23488

* another .py.in correction re #23488

* Hopefully the last of the .py.in files re #23488

* resolve utf-8 encoding of python files and changed ABINS checksum

re #23488

* updates to unit tests that reference line numbers

re #23488

* remaining unit test files and other fixes

re #23488

Update to clang-format-5 and reformat the codebase 

For muon Nexus v1 files, there is always a one-to-one mapping between
spectrum number and detector ID.

Set detector IDs in workspace so that they are correct in the case that
not all spectra are loaded, e.g. load spectra 1-5, 8-10 then detector IDs
shouldn't be 1-8 but 1-5, 8-10 also.

Add a note to documentation.

re #16628

Set a dummy instrument with the correct name.
This way MuonAnalysis will be able to say "unsupported instrument: xxxx"
rather than "unsupported instrument: ".

re #16396

re #16070

By inspection of the code, if LoadMuonNexus can't find the main field orientation, it sets it to longitudinal.
It only sets it to transverse if the NeXus file specifically contains a 't' in the relevant position.

re #15296

re #15450

re #15289

No reason to change the name of the property. Would be far more convient for existing clients if the name of this property remained the same.

Hopefully, it's a clearer and more concise version of what Anders requested.

Signed-off-by: Karl Palmen <karl.palmen@stfc.ac.uk>

and reference to LoadInstrumentFromNexus

Signed-off-by: Karl Palmen <karl.palmen@stfc.ac.uk>

Placeholder kept in comments

Signed-off-by: Karl Palmen <karl.palmen@stfc.ac.uk>

Fixing DataHandling, Kernel, MDAlgorithms, MDEvents and Nexus.

Plus tests for it.

This makes it more consistent with how the same property is named
in ApplyDeadTimeCorr.