diff --git a/scripts/Elemental_Analysis.py b/scripts/Elemental_Analysis.py
index e603d9f868349b1f63c8d517459c477da8820072..037dddc5c1eea69200d4a49e4a0d61420a8097ee 100644
--- a/scripts/Elemental_Analysis.py
+++ b/scripts/Elemental_Analysis.py
@@ -84,7 +84,7 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
self.element_data = {}
self.element_lines = {}
self.gamma_lines = []
- self.gamma_peaks = self._get_gamma_peaks()
+ self.gamma_peaks = self.ptable.peak_data["Gammas"]
self.electron_peaks = self._get_electron_peaks()
self.electron_lines = []
self._generate_element_widgets()
@@ -118,29 +118,29 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
self.iterate_over_selectors(False, primary_checkboxes=False)
self.plotting.update_canvas()
- def _get_gamma_peaks(self):
- gamma_peaks = self.ptable.peak_data["Gammas"]["Primary"]
- gamma_peaks.update(self.ptable.peak_data["Gammas"]["Secondary"])
- return gamma_peaks.copy()
-
def _plot_gammas(self, subplot, colour=None):
if colour is None:
colour = self.line_colours.next()
- for label, lines in iteritems(self.gamma_peaks):
- if lines is None:
- continue
- for line in lines:
+ for element, peaks in iteritems(self.gamma_peaks):
+ for peak_type, peak in iteritems(peaks):
+ if peak is None:
+ continue
self.gamma_lines.append(
subplot.axvline(
- line, 0, 1, color=colour))
+ peak, 0, 1, color=colour))
self.plotting.update_canvas()
+ def _iterate_over_gamma_selectors(self, check_state):
+ for element, selector in iteritems(self.element_widgets):
+ for checkbox in selector.gamma_checkboxes:
+ checkbox.setChecked(check_state)
+ selector.finish_selection()
+
def gammas_checked(self):
- colour = self.line_colours.next()
- for subplot_name, subplot in iteritems(self.plotting.get_subplots()):
- self._plot_gammas(subplot, colour=colour)
+ self._iterate_over_gamma_selectors(True)
def gammas_unchecked(self):
+ self._iterate_over_gamma_selectors(False)
for line in self.gamma_lines:
line.remove()
del line
@@ -245,6 +245,7 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
del line
self.element_lines[element][x_value] = []
del current_dict[label]
+ self.plotting.update_canvas()
elif current_dict != new_dict:
colour = self.line_colours.next()
dict_difference = {k: new_dict[k]
@@ -266,6 +267,10 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
if element in ["Gammas", "Electrons"]:
continue
data = self.ptable.element_data(element)
+ try:
+ data["Gammas"] = self.ptable.peak_data["Gammas"][element]
+ except KeyError:
+ pass
widget = PeakSelectorPresenter(PeakSelectorView(data, element))
widget.on_finished(self._update_peak_data)
self.element_widgets[element] = widget
diff --git a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
index 04a6c54237e4578ab435e147ef6f204dff0841d0..178d95277e5d2a90983db6fba9ea6d0bb6daa24b 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
@@ -3,6 +3,7 @@ class PeakSelectorPresenter(object):
self.view = view
self.primary_checkboxes = self.view.primary_checkboxes
self.secondary_checkboxes = self.view.secondary_checkboxes
+ self.gamma_checkboxes = self.view.gamma_checkboxes
def finish_selection(self):
self.view.finish_selection()
diff --git a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
index 79e7702357b2102f670ebe84fe618d27bc737dcd..19f758c3c38d30d7973eaf725af163baf381b5cf 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
@@ -24,6 +24,12 @@ class PeakSelectorView(QtGui.QListWidget):
secondary = peak_data["Secondary"]
self.secondary_checkboxes = self._create_checkbox_list(
"Secondary", secondary, checked=False)
+ try:
+ gammas = peak_data["Gammas"]
+ self.gamma_checkboxes = self._create_checkbox_list(
+ "Gammas", gammas, checked=False)
+ except KeyError:
+ self.gamma_checkboxes = []
widget.setLayout(self.list)
scroll = QtGui.QScrollArea()
@@ -50,17 +56,22 @@ class PeakSelectorView(QtGui.QListWidget):
new_data = data["Primary"].copy()
self.new_data = new_data
+ def _setup_checkbox(self, name, checked):
+ checkbox = Checkbox(name)
+ checkbox.setChecked(checked)
+ checkbox.on_checkbox_unchecked(self._remove_value_from_new_data)
+ checkbox.on_checkbox_checked(self._add_value_to_new_data)
+ self.list.addWidget(checkbox)
+ return checkbox
+
def _create_checkbox_list(self, heading, checkbox_data, checked=True):
_heading = QtGui.QLabel(heading)
self.list.addWidget(_heading)
checkboxes = []
for peak_type, value in iteritems(checkbox_data):
- checkbox = Checkbox("{}: {}".format(peak_type, value))
- checkbox.setChecked(checked)
- checkbox.on_checkbox_unchecked(self._remove_value_from_new_data)
- checkbox.on_checkbox_checked(self._add_value_to_new_data)
- self.list.addWidget(checkbox)
- checkboxes.append(checkbox)
+ checkboxes.append(
+ self._setup_checkbox(
+ "{}: {}".format(peak_type, value), checked))
return checkboxes
def _parse_checkbox_name(self, name):
diff --git a/scripts/Muon/GUI/ElementalAnalysis/peak_data.json b/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
index 05046297ee26892acfc51a2156fe3c77a4c51dd3..756cae3bb0b8417e6acada095d14224ed3e186e1 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
+++ b/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
@@ -1,2393 +1,2374 @@
{
- "Ag": {
- "Z": 47,
- "A": 107.87,
- "Primary": {
- "K(4->1)": 3177.7,
- "K(5->1)": 3184.9,
- "L(3->2)": 868.1,
- "L(4->2)": 900.7,
- "M(4->3)": 304.7,
- "6->5": 141
- },
- "Secondary": {
- "K(2->1)": 3140.6,
- "K(3->1)": 3147.8,
- "K(6->1)": 4050.9,
- "K(7->1)": 4042,
- "L(5->2)": 1171.6,
- "L(6->2)": 1207,
- "L(7->2)": 1311.9,
- "L(8->2)": 1347.8,
- "M(5->3)": 308.3,
- "M(6->3)": 444.8,
- "M(7->3)": 448.9,
- "M(8->3)": 521,
- "M(9->3)": 525.2,
- "M(10->3)": 567,
- "5->4": 141.1,
- "6->4": 217,
- "7->4": 262.7,
- "8->4": 292.5,
- "7->5": 152,
- "7->6": 76,
- "8->6": 122.2
- }
- },
- "Al": {
- "Z": 13,
- "A": 26.98,
- "Primary": {
- "K(2->1)": 346.8,
- "L(3->2)": 66.1
- },
- "Secondary": {
- "K(3->1)": 412.8,
- "K(4->1)": 435.8,
- "K(5->1)": 446.5,
- "K(6->1)": 452.3,
- "K(7->1)": 455.9,
- "L(4->2)": 89.1,
- "L(5->2)": 99.7,
- "L(6->2)": 105.5,
- "L(7->2)": 108.1,
- "M(4->3)": 21.8,
- "M(5->3)": 32.6,
- "M(6->3)": 38.4,
- "M(7->3)": 41.9
- }
- },
- "Ar": {
- "Z": 18,
- "A": 39.95,
- "Primary": {
- "K(2->1)": 643.7,
- "L(3->2)": 127.6
- },
- "Secondary": {
- "K(3->1)": 770.7,
- "K(4->1)": 815.1,
- "K(5->1)": 835.7,
- "K(6->1)": 846.8,
- "K(7->1)": 853.5,
- "K(8->1)": 857.9,
- "L(4->2)": 171.8,
- "L(5->2)": 192.3,
- "L(6->2)": 203.5,
- "L(7->2)": 210.1,
- "M(4->3)": 44.2,
- "M(5->3)": 64.7
- }
- },
- "As": {
- "Z": 33,
- "A": 74.92,
- "Primary": {
- "K(3->1)": 1869.7,
- "L(3->2)": 429,
- "L(4->2)": 438.5,
- "M(4->3)": 149.6
- },
- "Secondary": {
- "K(2->1)": 1859.4,
- "K(4->1)": 2297.4,
- "K(5->1)": 2448.2,
- "K(6->1)": 2517.3,
- "L(5->2)": 579,
- "L(6->2)": 588.7,
- "L(7->2)": 648.2,
- "L(8->2)": 658.4,
- "L(9->2)": 685.4,
- "L(10->2)": 694.2,
- "M(5->3)": 218.9,
- "M(6->3)": 256.5,
- "M(7->3)": 279.4
- }
- },
- "Au": {
- "Z": 79,
- "A": 196.97,
- "Primary": {
- "K(2->1)": 5590.6,
- "K(4->1)": 5763.8,
- "L(3->2)": 2343.5,
- "L(5->2)": 2479.3,
- "M(4->3)": 870,
- "M(5->3)": 899.2,
- "5->4": 400.2,
- "6->4": 405.7,
- "6->5": 216.8
- },
- "Secondary": {
- "K(3->1)": 5747.3,
- "L(4->2)": 2359.9,
- "7->4": 615.5,
- "8->4": 622,
- "9->4": 744.8,
- "7->5": 346.8
- }
- },
- "B": {
- "Z": 5,
- "A": 10.81,
- "Primary": {
- "K(2->1)": 52.2
- },
- "Secondary": {
- "K(3->1)": 61.9,
- "K(4->1)": 65.3,
- "K(5->1)": 66.9,
- "L(3->2)": 9.7
- }
- },
- "Ba": {
- "Z": 56,
- "A": 137.33,
- "Primary": {
- "K(3->1)": 3988.8,
- "L(3->2)": 1227,
- "L(4->2)": 1283.7,
- "M(4->3)": 434,
- "M(5->3)": 441.6,
- "5->4": 200.6
- },
- "Secondary": {
- "K(2->1)": 3922.9,
- "K(4->1)": 5197.8,
- "K(5->1)": 5213.7,
- "L(5->2)": 1659.6,
- "L(6->2)": 1721.9,
- "L(7->2)": 1859.4,
- "L(8->2)": 1923.6,
- "M(6->3)": 633.3,
- "M(7->3)": 641.8,
- "M(8->3)": 741.6,
- "M(9->3)": 750.5,
- "M(10->3)": 806.4,
- "M(11->3)": 815.1,
- "M(12->3)": 848.9,
- "M(13->3)": 857.9,
- "6->4": 308.9,
- "7->4": 374.1,
- "8->4": 416.6
- }
- },
- "Be": {
- "Z": 4,
- "A": 9.012,
- "Primary": {
- "K(2->1)": 33.4
- },
- "Secondary": {
- "K(3->1)": 39.6,
- "K(4->1)": 41.8,
- "K(5->1)": 42.8,
- "L(3->2)": 6.2
- }
- },
- "Bi": {
- "Z": 83,
- "A": 208.98,
- "Primary": {
- "K(2->1)": 5841.1,
- "K(3->1)": 6026.6,
- "K(4->1)": 6037.8,
- "L(3->2)": 2550.5,
- "L(4->2)": 2560.1,
- "L(5->2)": 2700.7,
- "M(4->3)": 961.3,
- "M(5->3)": 996.7,
- "5->4": 442.2,
- "6->4": 448.8,
- "6->5": 239.5
- },
- "Secondary": {
- "L(6->2)": 3511.3,
- "L(7->2)": 3678.5,
- "M(6->3)": 1400.6,
- "M(7->3)": 1440.5,
- "M(8->3)": 1640.5,
- "M(9->3)": 1681.2,
- "7->4": 679.9,
- "8->4": 687.5,
- "9->4": 823,
- "10->4": 831.7,
- "7->5": 383.1
- }
- },
- "Br": {
- "Z": 35,
- "A": 79.9,
- "Primary": {
- "K(3->1)": 2053.1,
- "L(3->2)": 482.3,
- "L(4->2)": 494,
- "M(4->3)": 170
- },
- "Secondary": {
- "K(2->1)": 2040,
- "K(4->1)": 2533.5,
- "K(5->1)": 2702.6,
- "K(6->1)": 2781.7,
- "K(7->1)": 2823.6,
- "K(8->1)": 2849.3,
- "L(5->2)": 650.4,
- "L(6->2)": 663.1,
- "L(7->2)": 728.1,
- "L(8->2)": 741,
- "L(9->2)": 771.1,
- "L(10->2)": 783.3,
- "M(5->3)": 246.4,
- "M(6->3)": 288.5
- }
- },
- "C": {
- "Z": 6,
- "A": 12.01,
- "Primary": {
- "K(2->1)": 75.2,
- "L(3->2)": 14
- },
- "Secondary": {
- "K(3->1)": 89.2,
- "K(4->1)": 94.1,
- "K(5->1)": 96.4,
- "L(4->2)": 18.9
- }
- },
- "Ca": {
- "Z": 20,
- "A": 40.08,
- "Primary": {
- "K(2->1)": 783.6,
- "L(3->2)": 157.3
- },
- "Secondary": {
- "K(3->1)": 940.6,
- "K(4->1)": 995.3,
- "K(5->1)": 1020.7,
- "K(6->1)": 1034.4,
- "K(7->1)": 1042.7,
- "L(4->2)": 212,
- "L(5->2)": 237.2,
- "L(6->2)": 250.9,
- "L(7->2)": 259.4,
- "L(8->2)": 264,
- "M(4->3)": 54.8,
- "M(5->3)": 80.1,
- "M(6->3)": 93.9,
- "M(7->3)": 102.3
- }
- },
- "Cd": {
- "Z": 48,
- "A": 112.41,
- "Primary": {
- "K(3->1)": 3231.2,
- "K(5->1)": 3266.2,
- "K(6->1)": 3269.8,
- "K(7->1)": 3277,
- "L(3->2)": 907,
- "L(4->2)": 941.9,
- "M(4->3)": 317.7,
- "M(5->3)": 321.7
- },
- "Secondary": {
- "K(2->1)": 3226.4,
- "K(4->1)": 3237.3,
- "K(8->1)": 4170.5,
- "K(9->1)": 4494.6,
- "L(5->2)": 1224.3,
- "L(6->2)": 1262.4,
- "L(7->2)": 1371.1,
- "L(8->2)": 1410.2,
- "L(9->2)": 1451.4,
- "L(10->2)": 1490.5,
- "M(6->3)": 464.3,
- "M(7->3)": 468.6,
- "M(8->3)": 543.9,
- "M(9->3)": 548.4,
- "M(10->3)": 591.8,
- "M(11->3)": 596.6,
- "5->4": 146.3,
- "6->4": 226,
- "7->4": 273.5,
- "6->5": 127.4,
- "7->6": 79.6
- }
- },
- "Ce": {
- "Z": 58,
- "A": 140.12,
- "Primary": {
- "K(4->1)": 4157.9,
- "K(5->1)": 4170.7,
- "L(3->2)": 1314.1,
- "L(4->2)": 1376.9,
- "M(4->3)": 463.5,
- "M(5->3)": 472.4,
- "5->4": 215.4
- },
- "Secondary": {
- "K(2->1)": 4085.3,
- "K(3->1)": 4097.4,
- "K(6->1)": 5465.7,
- "K(7->1)": 5482.1,
- "L(5->2)": 1778,
- "L(6->2)": 1847.9,
- "L(7->2)": 1993.8,
- "L(8->2)": 2065.3,
- "M(6->3)": 678.2,
- "M(7->3)": 688.1,
- "M(8->3)": 794.7,
- "M(9->3)": 804.9,
- "M(10->3)": 865.3,
- "M(11->3)": 875.6,
- "6->4": 331.5,
- "7->4": 401.5,
- "6->5": 116,
- "7->5": 186.1,
- "8->5": 231
- }
- },
- "Cl": {
- "Z": 17,
- "A": 35.45,
- "Primary": {
- "K(2->1)": 578.7,
- "L(3->2)": 113.4
- },
- "Secondary": {
- "K(3->1)": 691.9,
- "K(4->1)": 731.5,
- "K(5->1)": 749.7,
- "K(6->1)": 759.7,
- "K(7->1)": 765.4,
- "L(4->2)": 152.9,
- "L(5->2)": 171.1,
- "L(6->2)": 181.2,
- "L(7->2)": 187,
- "M(4->3)": 39.5,
- "M(5->3)": 57.7
- }
- },
- "Co": {
- "Z": 27,
- "A": 58.93,
- "Primary": {
- "K(3->1)": 1343.1,
- "L(3->2)": 286.6,
- "L(4->2)": 291.1,
- "M(4->3)": 99.9,
- "M(5->3)": 146
- },
- "Secondary": {
- "K(2->1)": 1338.2,
- "K(4->1)": 1629,
- "K(5->1)": 1729.4,
- "K(6->1)": 1775.9,
- "K(7->1)": 1801.6,
- "K(8->1)": 1816.3,
- "L(5->2)": 386.7,
- "L(6->2)": 391.3,
- "L(7->2)": 433.1,
- "L(8->2)": 437.7,
- "L(9->2)": 458.4,
- "L(10->2)": 463.5,
- "L(11->2)": 473.4,
- "L(12->2)": 478,
- "M(6->3)": 171.1,
- "M(7->3)": 186.5
- }
- },
- "Cr": {
- "Z": 24,
- "A": 52,
- "Primary": {
- "K(3->1)": 1092.5,
- "L(3->2)": 226,
- "L(4->2)": 228.8,
- "M(4->3)": 78.3,
- "5->4": 35.4
- },
- "Secondary": {
- "K(2->1)": 1089.3,
- "K(4->1)": 1317.8,
- "K(5->1)": 1397.2,
- "K(6->1)": 1433.7,
- "K(7->1)": 1453.8,
- "K(8->1)": 1465.5,
- "L(5->2)": 305,
- "L(6->2)": 308,
- "L(7->2)": 341.6,
- "L(8->2)": 344.9,
- "L(9->2)": 361.4,
- "L(10->2)": 364.5,
- "L(11->2)": 373.3,
- "L(12->2)": 376.5,
- "M(5->3)": 115,
- "M(6->3)": 134.9,
- "M(7->3)": 146.9,
- "6->4": 55.4,
- "7->4": 67.4
- }
- },
- "Cs": {
- "Z": 55,
- "A": 132.91,
- "Primary": {
- "K(3->1)": 3902.7,
- "L(3->2)": 1185.7,
- "L(4->2)": 1238.9,
- "M(4->3)": 418.4,
- "M(5->3)": 425.4,
- "5->4": 193.3
- },
- "Secondary": {
- "K(2->1)": 3840.7,
- "K(4->1)": 5073,
- "K(5->1)": 5086.1,
- "L(5->2)": 1602.9,
- "L(6->2)": 1661.7,
- "L(7->2)": 1795.7,
- "L(8->2)": 1856.1,
- "M(6->3)": 610.5,
- "M(7->3)": 618.4,
- "M(8->3)": 714.9,
- "M(9->3)": 723.5,
- "6->4": 297.7,
- "7->4": 360.7
- }
- },
- "Cu": {
- "Z": 29,
- "A": 63.54,
- "Primary": {
- "K(3->1)": 1514.2,
- "L(3->2)": 330.9,
- "L(4->2)": 336.6,
- "M(4->3)": 115.9,
- "6->4": 82.4
- },
- "Secondary": {
- "K(2->1)": 1507.7,
- "K(4->1)": 1843.7,
- "K(5->1)": 1959.7,
- "K(6->1)": 2013.1,
- "K(7->1)": 2042.1,
- "K(8->1)": 2059.9,
- "K(9->1)": 2070.9,
- "L(5->2)": 446.1,
- "L(6->2)": 452.2,
- "L(7->2)": 499.4,
- "L(8->2)": 505.7,
- "L(9->2)": 528.3,
- "L(10->2)": 534.4,
- "L(11->2)": 545.6,
- "L(12->2)": 564.5,
- "M(5->3)": 169.2,
- "M(6->3)": 198.1,
- "M(7->3)": 215.6,
- "M(8->3)": 234.4,
- "M(9->3)": 239.8,
- "5->4": 53.5,
- "7->4": 99.8,
- "8->4": 111.4
- }
- },
- "Dy": {
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- },
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- },
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- ],
- "g65Ni28": [
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}
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}