diff --git a/scripts/Elemental_Analysis.py b/scripts/Elemental_Analysis.py
index 6ee313549512b2c23933c279cecb5b5e1c47a9b6..04e7ef62568105b9de0829af600f9e23129948c6 100644
--- a/scripts/Elemental_Analysis.py
+++ b/scripts/Elemental_Analysis.py
@@ -3,8 +3,10 @@ from __future__ import absolute_import, print_function
from PyQt4 import QtGui
import sys
-import random
-from time import time
+
+from itertools import cycle
+
+from six import iteritems
from Muon.GUI.ElementalAnalysis.PeriodicTable.periodic_table_presenter import PeriodicTablePresenter
from Muon.GUI.ElementalAnalysis.PeriodicTable.periodic_table_view import PeriodicTableView
@@ -39,46 +41,167 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
self.ptable = PeriodicTablePresenter(
PeriodicTableView(), PeriodicTableModel())
- self.ptable.register_table_changed(self.table_changed)
self.ptable.register_table_lclicked(self.table_left_clicked)
self.ptable.register_table_rclicked(self.table_right_clicked)
self.load_widget = LoadPresenter(
LoadView(), LoadModel(), CoLoadModel())
+
+ self.load_widget.on_loading_finished(self.loading_finished)
+
self.widget_list = QtGui.QVBoxLayout()
self.detectors = DetectorsPresenter(DetectorsView())
+ for detector in self.detectors.detectors:
+ detector.on_checkbox_checked(self.add_plot)
+ detector.on_checkbox_unchecked(self.del_plot)
self.peaks = PeaksPresenter(PeaksView())
+ self.peaks.major.on_checkbox_checked(self.major_peaks_checked)
+ self.peaks.major.on_checkbox_unchecked(self.major_peaks_unchecked)
+ self.peaks.minor.on_checkbox_checked(self.minor_peaks_checked)
+ self.peaks.minor.on_checkbox_unchecked(self.minor_peaks_unchecked)
+ self.peaks.gamma.on_checkbox_checked(self.gammas_checked)
+ self.peaks.gamma.on_checkbox_unchecked(self.gammas_unchecked)
+ self.peaks.electron.on_checkbox_checked(self.electrons_checked)
+ self.peaks.electron.on_checkbox_unchecked(self.electrons_unchecked)
self.widget_list.addWidget(self.peaks.view)
self.widget_list.addWidget(self.detectors.view)
self.widget_list.addWidget(self.load_widget.view)
self.plotting = PlotPresenter(PlotView())
- self.plotting.view.setFixedSize(self.plotting.view.sizeHint())
-
- self.add = QtGui.QPushButton("Add")
- self.add.clicked.connect(self.add_plot)
-
- self.rem = QtGui.QPushButton("Del")
- self.rem.clicked.connect(self.del_plot)
+ self.plotting.view.setMinimumSize(self.plotting.view.sizeHint())
self.box = QtGui.QHBoxLayout()
self.box.addWidget(self.ptable.view)
self.box.addLayout(self.widget_list)
- self.box.addWidget(self.load_widget.view)
- self.box.addWidget(self.add)
- self.box.addWidget(self.rem)
- # layout.addWidget(self.plot_view)
+
self.setCentralWidget(QtGui.QWidget(self))
self.centralWidget().setLayout(self.box)
self.setWindowTitle("Elemental Analysis")
- self.plotting.view.show()
self.element_widgets = {}
self.element_data = {}
+ self.element_lines = {}
+ self.gamma_lines = []
+ self.gamma_peaks = self.ptable.peak_data["Gammas"]
+ self.electron_peaks = self._get_electron_peaks()
+ self.electron_lines = []
self._generate_element_widgets()
self._generate_element_data()
+ self.line_colours = cycle(["r", "g", "b", "c", "m", "y"])
+
+ def iterate_over_selectors(self, check_state, primary_checkboxes=True):
+ """
+ Iterates over element popups.
+
+ :param check_state: True or False - i.e. check boxes or not
+ :param primary_checkboxes: True if Primary, False if Secondary
+ """
+ for element, selector in iteritems(self.element_widgets):
+ for checkbox in selector.primary_checkboxes if primary_checkboxes else selector.secondary_checkboxes:
+ checkbox.setChecked(check_state)
+ selector.finish_selection()
+
+ def major_peaks_checked(self):
+ self.iterate_over_selectors(True, primary_checkboxes=True)
+
+ def major_peaks_unchecked(self):
+ self.iterate_over_selectors(False, primary_checkboxes=True)
+ self.plotting.update_canvas()
+
+ def minor_peaks_checked(self):
+ self.iterate_over_selectors(True, primary_checkboxes=False)
+
+ def minor_peaks_unchecked(self):
+ self.iterate_over_selectors(False, primary_checkboxes=False)
+ self.plotting.update_canvas()
+
+ def _plot_gammas(self, subplot, colour=None):
+ if colour is None:
+ colour = self.line_colours.next()
+ for element, peaks in iteritems(self.gamma_peaks):
+ for peak_type, peak in iteritems(peaks):
+ if peak is None:
+ continue
+ self.gamma_lines.append(
+ subplot.axvline(
+ peak, 0, 1, color=colour))
+ self.plotting.update_canvas()
+
+ def _iterate_over_gamma_selectors(self, check_state):
+ for element, selector in iteritems(self.element_widgets):
+ for checkbox in selector.gamma_checkboxes:
+ checkbox.setChecked(check_state)
+ selector.finish_selection()
+
+ def gammas_checked(self):
+ self._iterate_over_gamma_selectors(True)
+
+ def gammas_unchecked(self):
+ self._iterate_over_gamma_selectors(False)
+ for line in self.gamma_lines:
+ line.remove()
+ del line
+ self.gamma_lines = []
+ self.plotting.update_canvas()
+
+ def _get_electron_peaks(self):
+ return self.ptable.peak_data["Electrons"].copy()
+
+ def _plot_electrons(self, subplot, colour=None):
+ if colour is None:
+ colour = self.line_colours.next()
+ for peak, intensity in iteritems(self.electron_peaks):
+ # intensity will be used in the future for labelling lines
+ self.electron_lines.append(
+ subplot.axvline(
+ float(peak), 0, 1, color=colour))
+ self.plotting.update_canvas()
+
+ def electrons_checked(self):
+ colour = self.line_colours.next()
+ for subplot_name, subplot in iteritems(self.plotting.get_subplots()):
+ self._plot_electrons(subplot, colour=colour)
+
+ def electrons_unchecked(self):
+ for line in self.electron_lines:
+ line.remove()
+ del line
+ self.electron_lines = []
+ self.plotting.update_canvas()
+
+ def load_run(self, detector, run):
+ name = "{}; Detector {}".format(run, detector[-1])
+ subplot = self.plotting.add_subplot(detector)
+ subplot.set_title(detector)
+ for plot in mantid.mtd[name]:
+ self.plotting.plot(detector, plot)
+ if self.plotting.view.isHidden():
+ self.plotting.view.show()
+ if self.peaks.gamma.isChecked():
+ self._plot_gammas(subplot)
+ if self.peaks.electron.isChecked():
+ self._plot_electrons(subplot)
+ self.plotting.update_canvas()
+
+ def load_last_run(self, detector):
+ self.load_run(detector, self.load_widget.last_loaded_run())
+
+ def loading_finished(self):
+ last_run = self.load_widget.last_loaded_run()
+ if last_run is None:
+ return
+ self.plotting.view.setWindowTitle(str(last_run))
+ for plot in self.plotting.get_subplots():
+ self.plotting.remove_subplot(plot)
+ for detector in self.detectors.detectors:
+ if detector.isChecked():
+ self.load_run(detector.name, last_run)
+ for item in self.ptable.selection:
+ self._add_element_lines(
+ item.symbol, self.element_data[item.symbol])
+
def _generate_element_data(self):
for element in self.ptable.peak_data:
if element in ["Gammas", "Electrons"]:
@@ -89,8 +212,62 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
except KeyError:
continue
+ def _add_element_line(self, x_value, element, colour="b"):
+ if x_value is None:
+ return
+ for plot_name in self.plotting.get_subplots():
+ line = self.plotting.get_subplot(
+ plot_name).axvline(x_value, 0, 1, color=colour)
+ try:
+ self.element_lines[element][x_value].append(line)
+ except KeyError:
+ self.element_lines[element][x_value] = [line]
+ self.plotting.update_canvas()
+
+ def _add_element_lines(self, element, data):
+ self.element_lines[element] = {}
+ colour = self.line_colours.next()
+ for label, x_value in iteritems(data):
+ # label will be used in the future for labelling lines
+ self._add_element_line(x_value, element, colour=colour)
+
+ def _remove_element_lines(self, element):
+ for x_value, lines in iteritems(self.element_lines[element]):
+ for line in lines:
+ line.remove()
+ del line
+ self.plotting.update_canvas()
+ self.element_lines[element] = {}
+
+ def _update_element_lines(self, element, current_dict, new_dict):
+ # can be split up: this section removes lines
+ if len(current_dict) > len(new_dict): # i.e. item removed
+ dict_difference = {k: current_dict[k]
+ for k in set(current_dict) - set(new_dict)}
+ for label, x_value in iteritems(dict_difference):
+ # label will be used in the future for labelling lines
+ for line in self.element_lines[element][x_value]:
+ line.remove()
+ del line
+ self.element_lines[element][x_value] = []
+ del current_dict[label]
+ self.plotting.update_canvas()
+ # can be split up: this section adds lines
+ elif current_dict != new_dict: # i.e. item added or not closed without changes
+ colour = self.line_colours.next()
+ dict_difference = {k: new_dict[k]
+ for k in set(new_dict) - set(current_dict)}
+ for label, x_value in iteritems(dict_difference):
+ # label will be used in the future for labelling lines
+ self._add_element_line(x_value, element, colour)
+ current_dict.update(dict_difference)
+
def _update_peak_data(self, element, data):
- self.element_data[element] = data
+ if self.ptable.is_selected(element):
+ self._update_element_lines(
+ element, self.element_data[element], data)
+ else:
+ self.element_data[element] = data.copy()
def _generate_element_widgets(self):
self.element_widgets = {}
@@ -98,42 +275,69 @@ class ElementalAnalysisGui(QtGui.QMainWindow):
if element in ["Gammas", "Electrons"]:
continue
data = self.ptable.element_data(element)
+ try:
+ data["Gammas"] = self.ptable.peak_data["Gammas"][element]
+ except KeyError:
+ pass
widget = PeakSelectorPresenter(PeakSelectorView(data, element))
widget.on_finished(self._update_peak_data)
self.element_widgets[element] = widget
def table_left_clicked(self, item):
- print("Element Left Clicked: {}".format(
- self.element_data[item.symbol]))
+ if self.ptable.is_selected(item.symbol):
+ self._add_element_lines(
+ item.symbol, self.element_data[item.symbol])
+ else:
+ self._remove_element_lines(item.symbol)
def table_right_clicked(self, item):
self.element_widgets[item.symbol].view.show()
- print("Element Right Clicked: {}".format(item.symbol))
- def table_changed(self, items):
- print("Table Changed: {}".format([i.symbol for i in items]))
+ def _clear_lines(self, lines):
+ for line in lines:
+ line.remove()
+ del line
+ return []
+
+ def _clear_lines_after_data_file_selected(self):
+ for element in self.element_lines.keys():
+ self._remove_element_lines(element)
+ self.electron_lines = self._clear_lines(self.electron_lines)
+ self.gamma_lines = self._clear_lines(self.gamma_lines)
+ for checkbox in self.peaks.peak_checkboxes:
+ checkbox.setChecked(False)
def select_data_file(self):
filename = str(QtGui.QFileDialog.getOpenFileName())
if filename:
self.ptable.set_peak_datafile(filename)
+ self._clear_lines_after_data_file_selected()
self._generate_element_widgets()
self._generate_element_data()
- def add_plot(self):
- name = "Plot {}".format(time())
- subplot = self.plotting.add_subplot(name)
- self.plotting.call_plot_method(name, subplot.set_title, name)
- plot1 = mantid.CreateSampleWorkspace(OutputWorkspace=str(time()))
- self.plotting.plot(name, plot1)
- plot2 = mantid.Plus(plot1, plot1, OutputWorkspace=str(time()))
- self.plotting.plot(name, plot2)
- self.plotting.add_hline(name, 0.06, 0, 1)
- self.plotting.add_vline(name, 10100, 0, 1)
-
- def del_plot(self):
- to_del = random.choice(self.plotting.get_subplots().keys())
- self.plotting.remove_subplot(to_del)
+ def add_plot(self, checkbox):
+ detector = checkbox.name
+ last_run = self.load_widget.last_loaded_run()
+ # not using load_last_run prevents two calls to last_loaded_run()
+ if last_run is not None:
+ self.load_run(detector, last_run)
+ colour = self.line_colours.next()
+ for element in self.ptable.selection:
+ for label, x_value in iteritems(self.element_data[element.symbol]):
+ # label will be used in the future for labelling lines
+ line = self.plotting.get_subplot(detector).axvline(
+ x_value, 1, 0, color=colour)
+ try:
+ self.element_lines[element.symbol][x_value].append(line)
+ except KeyError:
+ self.element_lines[element.symbol][x_value] = [line]
+ self.plotting.update_canvas()
+
+ def del_plot(self, checkbox):
+ if self.load_widget.last_loaded_run() is not None:
+ self.plotting.remove_subplot(checkbox.name)
+ if not self.plotting.get_subplots():
+ self.plotting.view.close()
def qapp():
diff --git a/scripts/Muon/GUI/Common/load_widget/load_presenter.py b/scripts/Muon/GUI/Common/load_widget/load_presenter.py
index f157a9b174d20c2b1973fd45a8fadd9110ac47dd..fbc67b7a0a256e0090ed2aae3e388f5a0bf547a2 100644
--- a/scripts/Muon/GUI/Common/load_widget/load_presenter.py
+++ b/scripts/Muon/GUI/Common/load_widget/load_presenter.py
@@ -12,9 +12,11 @@ class LoadPresenter(object):
self.co_thread = None
self.view.on_load_clicked(self.equalise_loaded_runs)
+ self.view.on_load_clicked(self.equalise_last_loaded_run)
self.view.on_load_clicked(self.load_run)
self.view.on_load_clicked(self.co_model.wipe_co_runs)
self.view.on_co_add_clicked(self.equalise_loaded_runs)
+ self.view.on_co_add_clicked(self.equalise_last_loaded_run)
self.view.on_co_add_clicked(self.co_add_run)
self.view.on_spinbox_changed(self.update_models)
@@ -25,6 +27,13 @@ class LoadPresenter(object):
self.co_model.loaded_runs = loaded_runs
self.load_model.loaded_runs = loaded_runs
+ def equalise_last_loaded_run(self):
+ last_run = max(
+ self.co_model.last_loaded_runs,
+ self.load_model.last_loaded_runs)
+ self.co_model.last_loaded_runs = last_run
+ self.load_model.last_loaded_runs = last_run
+
def update_models(self, run):
self.load_model.set_run(run)
self.co_model.set_run(run)
@@ -59,3 +68,15 @@ class LoadPresenter(object):
def new_thread(self, model):
return thread_model.ThreadModel(model)
+
+ def last_loaded_run(self):
+ try:
+ return self.load_model.last_loaded_runs[-1]
+ except IndexError:
+ return None
+
+ def on_loading_finished(self, slot):
+ self.view.on_loading_finished(slot)
+
+ def unreg_on_loading_finished(self, slot):
+ self.view.unreg_on_loading_finished(slot)
diff --git a/scripts/Muon/GUI/Common/load_widget/load_view.py b/scripts/Muon/GUI/Common/load_widget/load_view.py
index 81fe4b1ac70b1069cf0a23021ecc220035f283ce..553460b42082a1d49e6529372f07e8423c46e50f 100644
--- a/scripts/Muon/GUI/Common/load_widget/load_view.py
+++ b/scripts/Muon/GUI/Common/load_widget/load_view.py
@@ -1,11 +1,13 @@
from __future__ import absolute_import
-from PyQt4 import QtGui
+from PyQt4 import QtGui, QtCore
from mantidqtpython import MantidQt
class LoadView(QtGui.QWidget):
+ sig_loading_finished = QtCore.pyqtSignal()
+
def __init__(self, parent=None):
super(LoadView, self).__init__(parent)
@@ -39,6 +41,7 @@ class LoadView(QtGui.QWidget):
self.spinbox.setEnabled(True)
self.load_button.setEnabled(True)
self.co_button.setEnabled(True)
+ self.sig_loading_finished.emit()
def on_load_clicked(self, slot):
self.load_button.clicked.connect(slot)
@@ -66,3 +69,12 @@ class LoadView(QtGui.QWidget):
self.spinbox.valueChanged.disconnect(slot)
except TypeError:
return
+
+ def on_loading_finished(self, slot):
+ self.sig_loading_finished.connect(slot)
+
+ def unreg_on_loading_finished(self, slot):
+ try:
+ self.sig_loading_finished.disconnect(slot)
+ except TypeError:
+ return
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Detectors/detectors_presenter.py b/scripts/Muon/GUI/ElementalAnalysis/Detectors/detectors_presenter.py
index 02247c792a083b4daf73e91ff845414338de9ac1..5e0fb6a0acebf460da14fb8bdfde763d43871321 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Detectors/detectors_presenter.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Detectors/detectors_presenter.py
@@ -1,3 +1,8 @@
class DetectorsPresenter(object):
def __init__(self, view):
self.view = view
+ self.detectors = [
+ self.view.GE1,
+ self.view.GE2,
+ self.view.GE3,
+ self.view.GE4]
diff --git a/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_model.py b/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_model.py
index 395c2f8f58f81bc3911c91752e520f73b73b3531..0e668b04cb689b3fc99f8245f193434e606d1180 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_model.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_model.py
@@ -12,6 +12,8 @@ class LoadModel(lutils.LModel):
def execute(self):
if self.run not in self.loaded_runs:
self.load_run()
+ else:
+ self.last_loaded_runs.append(self.run)
class CoLoadModel(lutils.LModel):
@@ -30,6 +32,8 @@ class CoLoadModel(lutils.LModel):
if current_ws is None:
return
self.loaded_runs[self.run] = current_ws
+ else:
+ self.last_loaded_runs.append(self.run)
if self.run not in self.co_runs:
self.co_runs.append(self.run)
if self.workspace:
@@ -45,6 +49,7 @@ class CoLoadModel(lutils.LModel):
def co_load_run(self, workspace):
run = lutils.hyphenise(self.co_runs)
+ self.last_loaded_runs.append(run)
to_add = [self.add_runs(l, r, run) for l, r in zip(*lutils.flatten_run_data(
self.workspace, workspace))]
self.workspace = lutils.group_by_detector(run, to_add)
diff --git a/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_utils.py b/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_utils.py
index feae9dd33ce7ad572dfa6ef428246e94178bd3e6..757cab4c7a2232c27259d54e91a46f6b58fe3093 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_utils.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/LoadWidget/load_utils.py
@@ -13,11 +13,13 @@ class LModel(object):
def __init__(self):
self.run = 0
self.loaded_runs = {}
+ self.last_loaded_runs = []
def _load(self, inputs):
""" inputs is a dict mapping filepaths to output names """
for path, output in iteritems(inputs):
- mantid.LoadAscii(path, OutputWorkspace=output)
+ workspace = mantid.LoadAscii(path, OutputWorkspace=output)
+ workspace.getAxis(0).setUnit("Label").setLabel("Energy", "keV")
def load_run(self):
to_load = search_user_dirs(self.run)
@@ -28,6 +30,7 @@ class LModel(object):
self._load(workspaces)
self.loaded_runs[self.run] = group_by_detector(
self.run, workspaces.values())
+ self.last_loaded_runs.append(self.run)
return self.loaded_runs[self.run]
def output(self):
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_presenter.py b/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_presenter.py
index 94ff1a5490fe9b6161da6d609a33f804b37e49ba..e6e7c0c731cf5eff3002253eed59ee6121a7435b 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_presenter.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_presenter.py
@@ -1,3 +1,8 @@
class PeaksPresenter(object):
def __init__(self, view):
self.view = view
+ self.major = self.view.major
+ self.minor = self.view.minor
+ self.gamma = self.view.gamma
+ self.electron = self.view.electron
+ self.peak_checkboxes = self.view.peak_checkboxes
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_view.py b/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_view.py
index e2674bd3597253fe59b1dcb91994897d5497cf5b..7a89dfe420fa95adfbcd4074f65c6d101d31fe62 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_view.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Peaks/peaks_view.py
@@ -13,6 +13,12 @@ class PeaksView(QtGui.QWidget):
self.minor = Checkbox("Minor Peaks")
self.gamma = Checkbox("Gamma Peaks")
self.electron = Checkbox("Electron Peaks")
- for peak_type in [self.major, self.minor, self.gamma, self.electron]:
+
+ self.peak_checkboxes = [
+ self.major,
+ self.minor,
+ self.gamma,
+ self.electron]
+ for peak_type in self.peak_checkboxes:
self.list.addWidget(peak_type)
self.setLayout(self.list)
diff --git a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
index d425b47519e0cdf4a9425e88b136d543dc1b7c8d..178d95277e5d2a90983db6fba9ea6d0bb6daa24b 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_presenter.py
@@ -1,6 +1,12 @@
class PeakSelectorPresenter(object):
def __init__(self, view):
self.view = view
+ self.primary_checkboxes = self.view.primary_checkboxes
+ self.secondary_checkboxes = self.view.secondary_checkboxes
+ self.gamma_checkboxes = self.view.gamma_checkboxes
+
+ def finish_selection(self):
+ self.view.finish_selection()
def update_peak_data(self, data):
self.view.update_peak_data(data)
diff --git a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
index 567a14476110ec007863b05abf876c0f964e3e66..19f758c3c38d30d7973eaf725af163baf381b5cf 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/PeriodicTable/PeakSelector/peak_selector_view.py
@@ -19,9 +19,17 @@ class PeakSelectorView(QtGui.QListWidget):
self.list = QtGui.QVBoxLayout(self)
primary = peak_data["Primary"]
- self._create_checkbox_list("Primary", primary)
+ self.primary_checkboxes = self._create_checkbox_list(
+ "Primary", primary)
secondary = peak_data["Secondary"]
- self._create_checkbox_list("Secondary", secondary, checked=False)
+ self.secondary_checkboxes = self._create_checkbox_list(
+ "Secondary", secondary, checked=False)
+ try:
+ gammas = peak_data["Gammas"]
+ self.gamma_checkboxes = self._create_checkbox_list(
+ "Gammas", gammas, checked=False)
+ except KeyError:
+ self.gamma_checkboxes = []
widget.setLayout(self.list)
scroll = QtGui.QScrollArea()
@@ -34,8 +42,11 @@ class PeakSelectorView(QtGui.QListWidget):
self.setLayout(scroll_layout)
- def closeEvent(self, event):
+ def finish_selection(self):
self.sig_finished_selection.emit(self.element, self.new_data)
+
+ def closeEvent(self, event):
+ self.finish_selection()
event.accept()
def update_new_data(self, data):
@@ -45,15 +56,23 @@ class PeakSelectorView(QtGui.QListWidget):
new_data = data["Primary"].copy()
self.new_data = new_data
+ def _setup_checkbox(self, name, checked):
+ checkbox = Checkbox(name)
+ checkbox.setChecked(checked)
+ checkbox.on_checkbox_unchecked(self._remove_value_from_new_data)
+ checkbox.on_checkbox_checked(self._add_value_to_new_data)
+ self.list.addWidget(checkbox)
+ return checkbox
+
def _create_checkbox_list(self, heading, checkbox_data, checked=True):
_heading = QtGui.QLabel(heading)
self.list.addWidget(_heading)
+ checkboxes = []
for peak_type, value in iteritems(checkbox_data):
- checkbox = Checkbox("{}: {}".format(peak_type, value))
- checkbox.setChecked(checked)
- checkbox.on_checkbox_unchecked(self._remove_value_from_new_data)
- checkbox.on_checkbox_checked(self._add_value_to_new_data)
- self.list.addWidget(checkbox)
+ checkboxes.append(
+ self._setup_checkbox(
+ "{}: {}".format(peak_type, value), checked))
+ return checkboxes
def _parse_checkbox_name(self, name):
peak_type, value = name.replace(" ", "").split(":")
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Plotting/AxisChanger/axis_changer_view.py b/scripts/Muon/GUI/ElementalAnalysis/Plotting/AxisChanger/axis_changer_view.py
index d6ecd9b645998089e0423ab12100d73cafdef14b..d46438c5f3bb4640b0702027fb50188409f66c05 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Plotting/AxisChanger/axis_changer_view.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Plotting/AxisChanger/axis_changer_view.py
@@ -1,25 +1,25 @@
-from PyQt4 import QtGui, QtCore
+from qtpy import QtGui, QtCore, QtWidgets
-class AxisChangerView(QtGui.QWidget):
- sig_lower_bound_changed = QtCore.pyqtSignal(object)
- sig_upper_bound_changed = QtCore.pyqtSignal(object)
+class AxisChangerView(QtWidgets.QWidget):
+ sig_lower_bound_changed = QtCore.Signal(object)
+ sig_upper_bound_changed = QtCore.Signal(object)
def __init__(self, label):
super(AxisChangerView, self).__init__()
- layout = QtGui.QHBoxLayout()
- layout.addWidget(QtGui.QLabel(label))
+ layout = QtWidgets.QHBoxLayout()
+ layout.addWidget(QtWidgets.QLabel(label))
- self.lower_bound = QtGui.QLineEdit()
+ self.lower_bound = QtWidgets.QLineEdit()
self.lower_bound.setValidator(QtGui.QDoubleValidator())
self.lower_bound.returnPressed.connect(self._lower_bound_changed)
- self.upper_bound = QtGui.QLineEdit()
+ self.upper_bound = QtWidgets.QLineEdit()
self.upper_bound.setValidator(QtGui.QDoubleValidator())
self.upper_bound.returnPressed.connect(self._upper_bound_changed)
layout.addWidget(self.lower_bound)
- layout.addWidget(QtGui.QLabel("to"))
+ layout.addWidget(QtWidgets.QLabel("to"))
layout.addWidget(self.upper_bound)
self.setLayout(layout)
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_presenter.py b/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_presenter.py
index 21dd910b2b2d1c98ff9d8911a201cd97f4c053a9..a31e8b68240f9f35ddc4c3aae69cfdf23902f702 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_presenter.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_presenter.py
@@ -2,6 +2,10 @@ class PlotPresenter(object):
def __init__(self, view):
self.view = view
+ def update_canvas(self):
+ """ Redraws the canvas. """
+ self.view.canvas.draw()
+
def get_subplot(self, name):
"""
Returns the subplot with the given name.
@@ -39,45 +43,6 @@ class PlotPresenter(object):
""" Removes the subplot corresponding to 'name' from the plotting window """
self.view.remove_subplot(name)
- def call_plot_method(self, name, func, *args, **kwargs):
- """
- Calls the function with the specified arguments and returns the result:
- the call will be 'saved' and 'replayed' when the plots are redrawn (errors checkbox is changed).
- """
- return self.view.call_plot_method(name, func, *args, **kwargs)
-
- def add_vline(self, plot_name, x_value, y_min, y_max, **kwargs):
- """
- Adds a vertical line to a plot.
-
- This line will be re-added when the plots are redrawn (errors checkbox is changed).
-
- :param plot_name: the plot on which to add the line
- :param x_value: the x value for the axvline
- :param y_min: 0 <= y_min <= 1. The minimum y-value of the line (multiple of the y-axis)
- :param y_min: 0 <= y_max <= 1. The maximum y-value of the line (multiple of the y-axis)
- :param **kwargs: any keyword arguments for the matplotlib line object
- :returns: a matplotlib line object
- :raise KeyError: if the subplot plot_name does not exist
- """
- return self.view.add_vline(plot_name, x_value, y_min, y_max, **kwargs)
-
- def add_hline(self, plot_name, y_value, x_min, x_max, **kwargs):
- """
- Adds a horizontal line to a plot.
-
- This line will be re-added when the plots are redrawn (errors checkbox is changed).
-
- :param plot_name: the plot on which to add the line
- :param y_value: the y value for the axvline
- :param x_min: 0 <= x_min <= 1. The minimum x-value of the line (multiple of the x-axis)
- :param x_min: 0 <= x_max <= 1. The maximum x-value of the line (multiple of the x-axis)
- :param **kwargs: any keyword arguments for the matplotlib line object
- :returns: a matplotlib line object
- :raise KeyError: if the subplot plot_name does not exist
- """
- return self.view.add_hline(plot_name, y_value, x_min, x_max, **kwargs)
-
def add_moveable_vline(self, plot_name, x_value, y_minx, y_max, **kwargs):
pass
diff --git a/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_view.py b/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_view.py
index 0a6a6b586a1deff9342a536389065e27a34d8d5a..1e93d7872dd258e1fc8332e06cd9d587567bdfdb 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_view.py
+++ b/scripts/Muon/GUI/ElementalAnalysis/Plotting/plotting_view.py
@@ -3,7 +3,7 @@ from six import iteritems
from mantid import plots
from collections import OrderedDict
-from PyQt4 import QtGui
+from qtpy import QtWidgets
from matplotlib.figure import Figure
from matplotlib import gridspec
@@ -16,13 +16,13 @@ from Muon.GUI.ElementalAnalysis.Plotting.AxisChanger.axis_changer_presenter impo
from Muon.GUI.ElementalAnalysis.Plotting.AxisChanger.axis_changer_view import AxisChangerView
-class PlotView(QtGui.QWidget):
+class PlotView(QtWidgets.QWidget):
def __init__(self):
super(PlotView, self).__init__()
self.plots = OrderedDict({})
self.errors_list = set()
self.workspaces = {}
- self.plot_additions = {}
+ self.workspace_plots = {} # stores the plotted 'graphs' for deletion
self.current_grid = None
self.gridspecs = {
1: gridspec.GridSpec(1, 1),
@@ -34,11 +34,11 @@ class PlotView(QtGui.QWidget):
self.figure.set_facecolor("none")
self.canvas = FigureCanvas(self.figure)
- self.plot_selector = QtGui.QComboBox()
+ self.plot_selector = QtWidgets.QComboBox()
self._update_plot_selector()
self.plot_selector.currentIndexChanged[str].connect(self._set_bounds)
- button_layout = QtGui.QHBoxLayout()
+ button_layout = QtWidgets.QHBoxLayout()
self.x_axis_changer = AxisChangerPresenter(AxisChangerView("X"))
self.x_axis_changer.on_upper_bound_changed(self._update_x_axis_upper)
self.x_axis_changer.on_lower_bound_changed(self._update_x_axis_lower)
@@ -47,7 +47,7 @@ class PlotView(QtGui.QWidget):
self.y_axis_changer.on_upper_bound_changed(self._update_y_axis_upper)
self.y_axis_changer.on_lower_bound_changed(self._update_y_axis_lower)
- self.errors = QtGui.QCheckBox("Errors")
+ self.errors = QtWidgets.QCheckBox("Errors")
self.errors.stateChanged.connect(self._errors_changed)
button_layout.addWidget(self.plot_selector)
@@ -55,7 +55,7 @@ class PlotView(QtGui.QWidget):
button_layout.addWidget(self.y_axis_changer.view)
button_layout.addWidget(self.errors)
- grid = QtGui.QGridLayout()
+ grid = QtWidgets.QGridLayout()
grid.addWidget(self.canvas, 0, 0)
grid.addLayout(button_layout, 1, 0)
self.setLayout(grid)
@@ -68,38 +68,33 @@ class PlotView(QtGui.QWidget):
"""
def wraps(self, *args, **kwargs):
- func(self, *args, **kwargs)
+ output = func(self, *args, **kwargs)
if len(self.plots):
self.figure.tight_layout()
self.canvas.draw()
- return wraps
-
- def _save_addition(func):
- """
- Simple decorator (@_save_addition) to 'Save' the function call to be
- replayed later when the plots are cleared.
- (https://www.python.org/dev/peps/pep-0318/)
- """
-
- def wraps(self, name, *args, **kwargs):
- try:
- self.plot_additions[name].append((func, name, args, kwargs))
- except KeyError:
- self.plot_additions[name] = [(func, name, args, kwargs)]
- func(self, name, *args, **kwargs)
+ return output
return wraps
def _silent_checkbox_check(self, state):
+ """ Checks a checkbox without emitting a checked event. """
self.errors.blockSignals(True)
self.errors.setChecked(state)
self.errors.blockSignals(False)
def _set_plot_bounds(self, name, plot):
+ """
+ Sets AxisChanger bounds to the given plot bounds and updates
+ the plot-specific error checkbox.
+ """
self.x_axis_changer.set_bounds(plot.get_xlim())
self.y_axis_changer.set_bounds(plot.get_ylim())
self._silent_checkbox_check(name in self.errors_list)
def _set_bounds(self, new_plot):
+ """
+ Sets AxisChanger bounds if a new plot is added, or removes the AxisChanger
+ fields if a plot is removed.
+ """
new_plot = str(new_plot)
if new_plot and new_plot != "All":
plot = self.get_subplot(new_plot)
@@ -109,15 +104,20 @@ class PlotView(QtGui.QWidget):
self.y_axis_changer.clear_bounds()
def _get_current_plot_name(self):
+ """ Returns the 'current' plot name based on the dropdown selector. """
return str(self.plot_selector.currentText())
def _get_current_plots(self):
+ """
+ Returns a list of the current plot, or all plots if 'All' is selected.
+ """
name = self._get_current_plot_name()
return self.plots.values() if name == "All" else [
self.get_subplot(name)]
@_redo_layout
def _update_x_axis(self, bound):
+ """ Updates the plot's x limits with the specified bound. """
try:
for plot in self._get_current_plots():
plot.set_xlim(**bound)
@@ -125,13 +125,16 @@ class PlotView(QtGui.QWidget):
return
def _update_x_axis_lower(self, bound):
+ """ Updates the lower x axis limit. """
self._update_x_axis({"left": bound})
def _update_x_axis_upper(self, bound):
+ """ Updates the upper x axis limit. """
self._update_x_axis({"right": bound})
@_redo_layout
def _update_y_axis(self, bound):
+ """ Updates the plot's y limits with the specified bound. """
try:
for plot in self._get_current_plots():
plot.set_ylim(**bound)
@@ -139,12 +142,17 @@ class PlotView(QtGui.QWidget):
return
def _update_y_axis_lower(self, bound):
+ """ Updates the lower y axis limit. """
self._update_y_axis({"bottom": bound})
def _update_y_axis_upper(self, bound):
+ """ Updates the upper y axis limit. """
self._update_y_axis({"top": bound})
def _modify_errors_list(self, name, state):
+ """
+ Adds/Removes a plot name to the errors set depending on the 'state' bool.
+ """
if state:
self.errors_list.add(name)
else:
@@ -154,20 +162,27 @@ class PlotView(QtGui.QWidget):
return
def _change_plot_errors(self, name, plot, state):
+ """
+ Removes the previous plot and redraws with/without errors depending on the state.
+ """
self._modify_errors_list(name, state)
workspaces = self.workspaces[name]
self.workspaces[name] = []
+ # get the limits before replotting, so they appear unchanged.
x, y = plot.get_xlim(), plot.get_ylim()
- plot.clear()
+ for old_plot in self.workspace_plots[name]:
+ old_plot.remove()
+ del old_plot
+ self.workspace_plots[name] = []
for workspace in workspaces:
self.plot(name, workspace)
plot.set_xlim(x)
plot.set_ylim(y)
- self._set_bounds(name)
- self._replay_additions(name)
+ self._set_bounds(name) # set AxisChanger bounds again.
@_redo_layout
def _errors_changed(self, state):
+ """ Replots subplots with errors depending on the current selection. """
current_name = self._get_current_plot_name()
if current_name == "All":
for name, plot in iteritems(self.plots):
@@ -176,18 +191,19 @@ class PlotView(QtGui.QWidget):
self._change_plot_errors(
current_name, self.get_subplot(current_name), state)
- def _replay_additions(self, name):
- for func, name, args, kwargs in self.plot_additions[name]:
- func(self, name, *args, **kwargs)
-
def _set_positions(self, positions):
+ """ Moves all subplots based on a gridspec change. """
for plot, pos in zip(self.plots.values(), positions):
grid_pos = self.current_grid[pos[0], pos[1]]
- plot.set_position(grid_pos.get_position(self.figure))
+ plot.set_position(
+ grid_pos.get_position(
+ self.figure)) # sets plot position, magic?
+ # required because tight_layout() is used.
plot.set_subplotspec(grid_pos)
@_redo_layout
def _update_gridspec(self, new_plots, last=None):
+ """ Updates the gridspec; adds a 'last' subplot if one is supplied. """
if new_plots:
self.current_grid = self.gridspecs[new_plots]
positions = putils.get_layout(new_plots)
@@ -201,11 +217,13 @@ class PlotView(QtGui.QWidget):
self._update_plot_selector()
def _update_plot_selector(self):
+ """ Updates plot selector (dropdown). """
self.plot_selector.clear()
self.plot_selector.addItem("All")
self.plot_selector.addItems(list(self.plots.keys()))
def _add_workspace_name(self, name, workspace):
+ """ Adds a workspace to a plot's list of workspaces. """
try:
if workspace not in self.workspaces[name]:
self.workspaces[name].append(workspace)
@@ -214,6 +232,7 @@ class PlotView(QtGui.QWidget):
@_redo_layout
def plot(self, name, workspace):
+ """ Plots a workspace to a subplot (with errors, if necessary). """
self._add_workspace_name(name, workspace)
if name in self.errors_list:
self.plot_workspace_errors(name, workspace)
@@ -221,18 +240,35 @@ class PlotView(QtGui.QWidget):
self.plot_workspace(name, workspace)
self._set_bounds(name)
+ def _add_plotted_line(self, name, lines):
+ """ Appends plotted lines to the related subplot list. """
+ try:
+ self.workspace_plots[name].extend(lines)
+ except KeyError:
+ self.workspace_plots[name] = lines
+
def plot_workspace_errors(self, name, workspace):
+ """ Plots a workspace with errrors, and appends caps/bars to the subplot list. """
subplot = self.get_subplot(name)
- plots.plotfunctions.errorbar(subplot, workspace, specNum=1)
+ line, cap_lines, bar_lines = plots.plotfunctions.errorbar(
+ subplot, workspace, specNum=1)
+ all_lines = [line]
+ all_lines.extend(cap_lines)
+ all_lines.extend(bar_lines)
+ self._add_plotted_line(name, all_lines)
def plot_workspace(self, name, workspace):
+ """ Plots a workspace normally. """
subplot = self.get_subplot(name)
- plots.plotfunctions.plot(subplot, workspace, specNum=1)
+ line, = plots.plotfunctions.plot(subplot, workspace, specNum=1)
+ self._add_plotted_line(name, [line])
def get_subplot(self, name):
+ """ Returns the subplot corresponding to a given name """
return self.plots[name]
def get_subplots(self):
+ """ Returns all subplots. """
return self.plots
def add_subplot(self, name):
@@ -245,35 +281,12 @@ class PlotView(QtGui.QWidget):
self.figure.delaxes(self.get_subplot(name))
del self.plots[name]
del self.workspaces[name]
- del self.plot_additions[name]
self._update_gridspec(len(self.plots))
@_redo_layout
- @_save_addition
- def call_plot_method(self, name, func, *args, **kwargs):
- """
- Allows an arbitrary function call to be replayed
- """
- return func(*args, **kwargs)
-
- @_redo_layout
- @_save_addition
- def add_vline(self, plot_name, x_value, y_min, y_max, **kwargs):
- return self.get_subplot(plot_name).axvline(
- x_value, y_min, y_max, **kwargs)
-
- @_redo_layout
- @_save_addition
- def add_hline(self, plot_name, y_value, x_min, x_max, **kwargs):
- return self.get_subplot(plot_name).axhline(
- y_value, x_min, x_max, **kwargs)
-
- @_redo_layout
- @_save_addition
def add_moveable_vline(self, plot_name, x_value, y_minx, y_max, **kwargs):
pass
@_redo_layout
- @_save_addition
def add_moveable_hline(self, plot_name, y_value, x_min, x_max, **kwargs):
pass
diff --git a/scripts/Muon/GUI/ElementalAnalysis/peak_data.json b/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
index 05046297ee26892acfc51a2156fe3c77a4c51dd3..756cae3bb0b8417e6acada095d14224ed3e186e1 100644
--- a/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
+++ b/scripts/Muon/GUI/ElementalAnalysis/peak_data.json
@@ -1,2393 +1,2374 @@
{
- "Ag": {
- "Z": 47,
- "A": 107.87,
- "Primary": {
- "K(4->1)": 3177.7,
- "K(5->1)": 3184.9,
- "L(3->2)": 868.1,
- "L(4->2)": 900.7,
- "M(4->3)": 304.7,
- "6->5": 141
- },
- "Secondary": {
- "K(2->1)": 3140.6,
- "K(3->1)": 3147.8,
- "K(6->1)": 4050.9,
- "K(7->1)": 4042,
- "L(5->2)": 1171.6,
- "L(6->2)": 1207,
- "L(7->2)": 1311.9,
- "L(8->2)": 1347.8,
- "M(5->3)": 308.3,
- "M(6->3)": 444.8,
- "M(7->3)": 448.9,
- "M(8->3)": 521,
- "M(9->3)": 525.2,
- "M(10->3)": 567,
- "5->4": 141.1,
- "6->4": 217,
- "7->4": 262.7,
- "8->4": 292.5,
- "7->5": 152,
- "7->6": 76,
- "8->6": 122.2
- }
- },
- "Al": {
- "Z": 13,
- "A": 26.98,
- "Primary": {
- "K(2->1)": 346.8,
- "L(3->2)": 66.1
- },
- "Secondary": {
- "K(3->1)": 412.8,
- "K(4->1)": 435.8,
- "K(5->1)": 446.5,
- "K(6->1)": 452.3,
- "K(7->1)": 455.9,
- "L(4->2)": 89.1,
- "L(5->2)": 99.7,
- "L(6->2)": 105.5,
- "L(7->2)": 108.1,
- "M(4->3)": 21.8,
- "M(5->3)": 32.6,
- "M(6->3)": 38.4,
- "M(7->3)": 41.9
- }
- },
- "Ar": {
- "Z": 18,
- "A": 39.95,
- "Primary": {
- "K(2->1)": 643.7,
- "L(3->2)": 127.6
- },
- "Secondary": {
- "K(3->1)": 770.7,
- "K(4->1)": 815.1,
- "K(5->1)": 835.7,
- "K(6->1)": 846.8,
- "K(7->1)": 853.5,
- "K(8->1)": 857.9,
- "L(4->2)": 171.8,
- "L(5->2)": 192.3,
- "L(6->2)": 203.5,
- "L(7->2)": 210.1,
- "M(4->3)": 44.2,
- "M(5->3)": 64.7
- }
- },
- "As": {
- "Z": 33,
- "A": 74.92,
- "Primary": {
- "K(3->1)": 1869.7,
- "L(3->2)": 429,
- "L(4->2)": 438.5,
- "M(4->3)": 149.6
- },
- "Secondary": {
- "K(2->1)": 1859.4,
- "K(4->1)": 2297.4,
- "K(5->1)": 2448.2,
- "K(6->1)": 2517.3,
- "L(5->2)": 579,
- "L(6->2)": 588.7,
- "L(7->2)": 648.2,
- "L(8->2)": 658.4,
- "L(9->2)": 685.4,
- "L(10->2)": 694.2,
- "M(5->3)": 218.9,
- "M(6->3)": 256.5,
- "M(7->3)": 279.4
- }
- },
- "Au": {
- "Z": 79,
- "A": 196.97,
- "Primary": {
- "K(2->1)": 5590.6,
- "K(4->1)": 5763.8,
- "L(3->2)": 2343.5,
- "L(5->2)": 2479.3,
- "M(4->3)": 870,
- "M(5->3)": 899.2,
- "5->4": 400.2,
- "6->4": 405.7,
- "6->5": 216.8
- },
- "Secondary": {
- "K(3->1)": 5747.3,
- "L(4->2)": 2359.9,
- "7->4": 615.5,
- "8->4": 622,
- "9->4": 744.8,
- "7->5": 346.8
- }
- },
- "B": {
- "Z": 5,
- "A": 10.81,
- "Primary": {
- "K(2->1)": 52.2
- },
- "Secondary": {
- "K(3->1)": 61.9,
- "K(4->1)": 65.3,
- "K(5->1)": 66.9,
- "L(3->2)": 9.7
- }
- },
- "Ba": {
- "Z": 56,
- "A": 137.33,
- "Primary": {
- "K(3->1)": 3988.8,
- "L(3->2)": 1227,
- "L(4->2)": 1283.7,
- "M(4->3)": 434,
- "M(5->3)": 441.6,
- "5->4": 200.6
- },
- "Secondary": {
- "K(2->1)": 3922.9,
- "K(4->1)": 5197.8,
- "K(5->1)": 5213.7,
- "L(5->2)": 1659.6,
- "L(6->2)": 1721.9,
- "L(7->2)": 1859.4,
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- "M(4->3)": 158.6
- },
- "Secondary": {
- "K(2->1)": 1945.3,
- "K(4->1)": 2410.3,
- "K(5->1)": 2570.9,
- "K(6->1)": 2645.7,
- "K(7->1)": 2686.5,
- "K(8->1)": 2710.8,
- "K(9->1)": 2726.8,
- "K(10->1)": 2737.6,
- "L(5->2)": 614.5,
- "L(6->2)": 625.7,
- "L(7->2)": 688.2,
- "L(8->2)": 699.5,
- "L(9->2)": 728.2,
- "L(10->2)": 739,
- "L(11->2)": 752.2,
- "L(12->2)": 763.3,
- "M(5->3)": 232.3,
- "M(6->3)": 272.3,
- "M(7->3)": 296.3
- }
- },
- "Si": {
- "Z": 14,
- "A": 28.08,
- "Primary": {
- "K(2->1)": 400.1,
- "L(3->2)": 76.6
- },
- "Secondary": {
- "K(3->1)": 476.7,
- "K(4->1)": 503.5,
- "K(5->1)": 515.8,
- "K(6->1)": 522.5,
- "K(7->1)": 526.6,
- "L(4->2)": 103.5,
- "L(5->2)": 115.8,
- "L(6->2)": 122.4,
- "L(7->2)": 126.7,
- "M(4->3)": 26.9,
- "M(5->3)": 39.2
- }
- },
- "Sm": {
- "Z": 62,
- "A": 150.36,
- "Primary": {
- "K(7->1)": 4502.7,
- "L(6->2)": 1496.1,
- "L(9->2)": 1572.1,
- "M(4->3)": 530.9,
- "M(5->3)": 542.2,
- "5->4": 245.3,
- "6->4": 247.4,
- "6->5": 133.1
- },
- "Secondary": {
- "K(2->1)": 4307,
- "K(3->1)": 4342.1,
- "K(4->1)": 4360.9,
- "K(5->1)": 4407.9,
- "K(6->1)": 4478.1,
- "K(8->1)": 4533.3,
- "L(3->2)": 1442.8,
- "L(4->2)": 1460.9,
- "L(5->2)": 1481.9,
- "L(7->2)": 1523.2,
- "L(8->2)": 1547.6,
- "L(10->2)": 1681.2,
- "M(6->3)": 776.2,
- "M(7->3)": 789.5,
- "M(8->3)": 910.1,
- "M(9->3)": 922.9,
- "7->4": 377.9,
- "8->4": 380.4,
- "9->4": 457.7,
- "10->4": 460.5,
- "7->5": 212.6
- }
- },
- "Sn": {
- "Z": 50,
- "A": 118.71,
- "Primary": {
- "K(3->1)": 3458.6,
- "L(3->2)": 982.5,
- "L(4->2)": 1022.4,
- "M(4->3)": 345.3,
- "M(5->3)": 349.9,
- "5->4": 159.8
- },
- "Secondary": {
- "K(2->1)": 3413.1,
- "K(4->1)": 4434.5,
- "K(5->1)": 4779.9,
- "L(5->2)": 1326.4,
- "L(6->2)": 1369.8,
- "L(7->2)": 1485,
- "L(8->2)": 1530.3,
- "M(6->3)": 504,
- "M(7->3)": 510.6,
- "M(8->3)": 590.1,
- "M(9->3)": 595.9,
- "6->4": 245.8,
- "7->4": 297.6
- }
- },
- "Sr": {
- "Z": 38,
- "A": 87.62,
- "Primary": {
- "K(3->1)": 2343.2,
- "L(3->2)": 569,
- "L(4->2)": 584.6,
- "M(4->3)": 199.5
- },
- "Secondary": {
- "K(2->1)": 2326.3,
- "K(4->1)": 2909.7,
- "K(5->1)": 3108.7,
- "K(6->1)": 3200.5,
- "L(5->2)": 767.2,
- "L(6->2)": 784.3,
- "L(7->2)": 858.8,
- "L(8->2)": 876.3,
- "L(9->2)": 908.8,
- "L(10->2)": 926.7,
- "M(5->3)": 291.2,
- "M(6->3)": 340.9,
- "M(7->3)": 370.9
- }
- },
- "Ta": {
- "Z": 73,
- "A": 180.95,
- "Primary": {
- "K(3->1)": 5137.2,
- "L(3->2)": 1987.8,
- "L(4->2)": 2011.2,
- "L(8->2)": 2100.2,
- "L(9->2)": 2164.6,
- "M(4->3)": 738.3,
- "M(5->3)": 744.7,
- "M(6->3)": 760,
- "M(7->3)": 767,
- "5->4": 341.2,
- "6->4": 345.3,
- "6->5": 185
- },
- "Secondary": {
- "K(2->1)": 5093.5,
- "K(4->1)": 5189.4,
- "K(5->1)": 5202.8,
- "K(6->1)": 5231.1,
- "K(7->1)": 5268.9,
- "K(8->1)": 5305.3,
- "K(9->1)": 5323.2,
- "K(10->1)": 5340.2,
- "K(11->1)": 5354.4,
- "L(5->2)": 2027.2,
- "L(6->2)": 2069.3,
- "L(7->2)": 2079.6,
- "L(10->2)": 2178.8,
- "M(8->3)": 1077.2,
- "M(9->3)": 1083.9,
- "M(10->3)": 1101.9,
- "M(11->3)": 1108.9,
- "7->4": 525,
- "8->4": 529.8,
- "9->4": 635.6,
- "10->4": 640.9,
- "7->5": 295.8,
- "8->6": 215,
- "9->6": 268
- }
- },
- "Tb": {
- "Z": 65,
- "A": 158.93,
- "Primary": {
- "K(4->1)": 4570.3,
- "K(7->1)": 4706.1,
- "L(3->2)": 1580,
- "L(5->2)": 1614.2,
- "L(10->2)": 1741.7,
- "M(4->3)": 586.4,
- "M(5->3)": 600.6,
- "5->4": 270,
- "6->4": 272.6,
- "6->5": 146.8
- },
- "Secondary": {
- "K(2->1)": 4516.7,
- "K(3->1)": 4548.5,
- "K(5->1)": 4606.9,
- "K(6->1)": 4653.4,
- "K(8->1)": 4737.5,
- "K(9->1)": 4747.6,
- "L(4->2)": 1595.4,
- "L(6->2)": 1623,
- "L(7->2)": 1670.7,
- "L(8->2)": 1698,
- "L(9->2)": 1720.1,
- "M(6->3)": 855.5,
- "M(7->3)": 871.7,
- "M(8->3)": 1002.1,
- "M(9->3)": 1018.3,
- "7->4": 415.6,
- "8->4": 418.6,
- "9->4": 503.2,
- "10->4": 506.6,
- "7->5": 234.4,
- "8->5": 290.9
- }
- },
- "Tc": {
- "Z": 43,
- "A": null,
- "Primary": null,
- "Secondary": null
- },
- "Te": {
- "Z": 52,
- "A": 127.6,
- "Primary": {
- "K(3->1)": 3628.6,
- "L(3->2)": 1062.2,
- "L(4->2)": 1107.1,
- "M(4->3)": 373.7,
- "M(5->3)": 379.3,
- "5->4": 172.3
- },
- "Secondary": {
- "K(2->1)": 3576.6,
- "K(4->1)": 4682.8,
- "L(5->2)": 1434.4,
- "L(6->2)": 1484,
- "L(7->2)": 1604,
- "L(8->2)": 1655.5,
- "M(6->3)": 545.7,
- "M(7->3)": 552,
- "M(8->3)": 639.6,
- "M(9->3)": 645.5,
- "M(10->3)": 695.2,
- "M(11->3)": 702.6,
- "6->4": 266,
- "7->4": 321.6
- }
- },
- "Th": {
- "Z": 90,
- "A": 232.04,
- "Primary": {
- "K(2->1)": 6050.4,
- "K(3->1)": 6069.5,
- "K(4->1)": 6302.8,
- "L(4->2)": 3125.2,
- "L(5->2)": 3147.3,
- "M(4->3)": 1124.9,
- "M(5->3)": 1142.4,
- "M(6->3)": 1184.2,
- "5->4": 520.1,
- "6->4": 529.4,
- "6->5": 281.4,
- "7->5": 283.9
- },
- "Secondary": {
- "K(5->1)": 6350.4,
- "K(6->1)": 6379.1,
- "K(7->1)": 6404.2,
- "K(8->1)": 6452.3,
- "L(3->2)": 3093.1,
- "M(7->3)": 1644.7,
- "M(8->3)": 1661.3,
- "M(9->3)": 1710.2,
- "7->4": 799.1,
- "8->4": 810.2,
- "9->4": 967.7,
- "10->4": 979.2,
- "8->5": 449.6,
- "7->6": 452.8
- }
- },
- "Ti": {
- "Z": 22,
- "A": 47.87,
- "Primary": {
- "K(2->1)": 931.8,
- "L(3->2)": 189.6,
- "L(4->2)": 191.5,
- "M(4->3)": 65.4
- },
- "Secondary": {
- "K(3->1)": 1121.9,
- "K(4->1)": 1188.4,
- "K(5->1)": 1219,
- "K(6->1)": 1235.7,
- "K(7->1)": 1245.7,
- "L(5->2)": 255.9,
- "L(6->2)": 258,
- "L(7->2)": 286.6,
- "L(8->2)": 288.6,
- "L(9->2)": 303.2,
- "L(10->2)": 305.4,
- "L(11->2)": 313.3,
- "L(12->2)": 315.6,
- "M(5->3)": 96.3,
- "M(6->3)": 113,
- "M(7->3)": 123.1
- }
- },
- "Tl": {
- "Z": 81,
- "A": 204.38,
- "Primary": {
- "K(2->1)": 5714.9,
- "K(3->1)": 5895,
- "L(3->2)": 2450.9,
- "L(4->2)": 2589.5,
- "M(4->3)": 914.9,
- "M(5->3)": 947.4,
- "5->4": 420.9,
- "6->4": 426.9,
- "6->5": 228
- },
- "Secondary": {
- "K(4->1)": 8338,
- "L(5->2)": 3356.9,
- "L(6->2)": 3518.7,
- "M(6->3)": 1333.8,
- "M(7->3)": 1370.3,
- "M(8->3)": 1563.2,
- "M(9->3)": 1600.2,
- "7->4": 647.2,
- "8->4": 654.4,
- "9->4": 783.7,
- "10->4": 791.4,
- "7->5": 364.5
- }
- },
- "Tm": {
- "Z": 69,
- "A": 168.93,
- "Primary": {
- "K(3->1)": 4843.1,
- "K(4->1)": 4861.6,
- "K(6->1)": 4999.8,
- "K(7->1)": 5046.4,
- "L(3->2)": 1773.6,
- "L(4->2)": 1781.6,
- "L(6->2)": 1825.7,
- "L(7->2)": 1905.8,
- "L(8->2)": 1947.1,
- "L(9->2)": 1960.5,
- "M(4->3)": 662.5,
- "M(5->3)": 680.4,
- "5->4": 304.5
- },
- "Secondary": {
- "K(2->1)": 4805.3,
- "K(5->1)": 4927.7,
- "L(5->2)": 1796.1,
- "M(6->3)": 965.3,
- "M(7->3)": 985.2,
- "M(8->3)": 1130.4,
- "M(9->3)": 1151.2,
- "6->4": 307.7,
- "7->4": 468.6,
- "8->4": 472.3,
- "9->4": 567.5,
- "10->4": 571.6,
- "6->5": 165.6,
- "7->5": 264.3
- }
- },
- "V": {
- "Z": 23,
- "A": 50.94,
- "Primary": {
- "K(2->1)": 1010.7,
- "L(3->2)": 207.4,
- "L(4->2)": 209.8,
- "M(4->3)": 71.7,
- "5->4": 32.4
- },
- "Secondary": {
- "K(3->1)": 1219.2,
- "K(4->1)": 1292.4,
- "K(5->1)": 1325.7,
- "K(6->1)": 1343.8,
- "K(7->1)": 1354.9,
- "L(5->2)": 280,
- "L(6->2)": 282.4,
- "L(7->2)": 313.5,
- "L(8->2)": 316,
- "L(9->2)": 331.6,
- "L(10->2)": 334.3,
- "L(11->2)": 342.3,
- "L(12->2)": 345.2,
- "M(5->3)": 105.4,
- "M(6->3)": 123.8,
- "M(7->3)": 134.5,
- "M(8->3)": 141.9,
- "6->4": 50.6,
- "7->4": 61.7
- }
- },
- "W": {
- "Z": 74,
- "A": 183.84,
- "Primary": {
- "K(3->1)": 5220.6,
- "K(7->1)": 5411.8,
- "L(3->2)": 2048.1,
- "L(7->2)": 2210.5,
- "M(4->3)": 762.7,
- "M(5->3)": 785.1,
- "5->4": 350.5,
- "6->4": 354.7,
- "6->5": 190.3
- },
- "Secondary": {
- "K(2->1)": 5186.8,
- "K(4->1)": 5284.2,
- "K(5->1)": 5299.4,
- "K(6->1)": 5318.9,
- "L(4->2)": 2148.9,
- "L(5->2)": 2161.8,
- "L(6->2)": 2173.6,
- "M(6->3)": 1111.5,
- "M(7->3)": 1137,
- "M(8->3)": 1300.4,
- "M(9->3)": 1327.8,
- "7->4": 539.3,
- "8->4": 544.3,
- "9->4": 653,
- "10->4": 658.4,
- "7->5": 304.1
- }
- },
- "Xe": {
- "Z": 54,
- "A": 131.29,
- "Primary": null,
- "Secondary": null
- },
- "Y": {
- "Z": 39,
- "A": 88.91,
- "Primary": {
- "K(3->1)": 2441.1,
- "L(3->2)": 599.9,
- "L(4->2)": 617.2,
- "M(4->3)": 209.9,
- "5->4": 96.3
- },
- "Secondary": {
- "K(2->1)": 2421.8,
- "K(4->1)": 3039.5,
- "K(5->1)": 3251.2,
- "K(6->1)": 3348.3,
- "L(5->2)": 809,
- "L(6->2)": 827.6,
- "L(7->2)": 906,
- "L(8->2)": 924.9,
- "L(9->2)": 977.8,
- "L(10->2)": 990.6,
- "L(11->2)": 1009.2,
- "M(5->3)": 306.6,
- "M(6->3)": 359.1,
- "M(7->3)": 390.7,
- "M(8->3)": 410.8,
- "M(9->3)": 424.9,
- "6->4": 148.8,
- "7->4": 180.6,
- "8->4": 201
- }
- },
- "Yb": {
- "Z": 70,
- "A": 173.05,
- "Primary": {
- "K(2->1)": 4890.1,
- "K(3->1)": 4922.4,
- "K(6->1)": 5105.9,
- "L(3->2)": 1845.9,
- "L(4->2)": 1982.8,
- "L(5->2)": 2006.4,
- "M(4->3)": 681.7,
- "M(5->3)": 699.9,
- "5->4": 313.7,
- "6->4": 317.1
- },
- "Secondary": {
- "K(4->1)": 4968.2,
- "K(5->1)": 5050.5,
- "M(6->3)": 993.6,
- "M(7->3)": 1014.2,
- "M(8->3)": 1162.8,
- "M(9->3)": 1184.6,
- "7->4": 482.5,
- "8->4": 486.6,
- "9->4": 585,
- "10->4": 588.6,
- "6->5": 170.2,
- "7->5": 272.4
- }
- },
- "Zn": {
- "Z": 30,
- "A": 65.38,
- "Primary": {
- "K(3->1)": 1602.9,
- "L(3->2)": 354.2,
- "L(4->2)": 360.8,
- "M(4->3)": 123.3,
- "M(5->3)": 180.5,
- "5->4": 56.3
- },
- "Secondary": {
- "K(2->1)": 1595.7,
- "K(4->1)": 1956,
- "K(5->1)": 2080.3,
- "K(6->1)": 2137.8,
- "K(7->1)": 2169.1,
- "K(8->1)": 2187.2,
- "L(5->2)": 477.8,
- "L(6->2)": 484.8,
- "L(7->2)": 535,
- "L(8->2)": 542.1,
- "L(9->2)": 566.2,
- "L(10->2)": 573.3,
- "L(11->2)": 584.9,
- "L(12->2)": 592.1,
- "M(6->3)": 211.7,
- "M(7->3)": 230.4,
- "M(8->3)": 242.3,
- "M(9->3)": 250.4,
- "6->4": 88.2,
- "7->4": 106,
- "8->4": 118.7
- }
- },
- "Zr": {
- "Z": 40,
- "A": 91.22,
- "Primary": {
- "K(4->1)": 2515.3,
- "K(7->1)": 2536.4,
- "L(3->2)": 630.5,
- "L(4->2)": 649.3,
- "M(4->3)": 220.8,
- "M(5->3)": 222.7
- },
- "Secondary": {
- "K(2->1)": 2501.3,
- "K(3->1)": 2507.1,
- "K(5->1)": 2522.3,
- "K(6->1)": 2528.1,
- "K(8->1)": 3161.2,
- "K(9->1)": 3384.3,
- "K(10->1)": 3482.3,
- "L(5->2)": 850.2,
- "L(6->2)": 870.4,
- "L(7->2)": 952.2,
- "L(8->2)": 972.6,
- "L(9->2)": 1007.1,
- "L(10->2)": 1028.4,
- "L(11->2)": 1040.2,
- "L(12->2)": 1061.3,
- "M(6->3)": 322.1,
- "M(7->3)": 324.2,
- "M(8->3)": 377.1,
- "M(9->3)": 379.2,
- "M(10->3)": 410.3,
- "M(11->3)": 412.5,
- "5->4": 102.7,
- "6->4": 157.7,
- "7->4": 190.8,
- "8->4": 212.4
- }
- },
- "Electrons": {
- "72.8": 0.59,
- "75.0": 1,
- "84.45": 0.12,
- "84.94": 0.22,
- "87.3": 0.1
- },
- "Gammas": {
- "Primary": {
- "g54Mn25": [
- 1528
- ],
- "g55Mn25": [
- 126
- ]
- },
- "Secondary": {
- "72Ge(n,n')72Ge": [
- 691
- ],
- "73Ge(n,g)74Ge": null,
- "74Ge(n,n')74Ge": [
- 595.7
- ],
- "g196Pt78": [
- 355.8
- ],
- "g54Mn25": [
- 54.5,
- 156.2,
- 212,
- 251.6,
- 376.9
- ],
- "g61Ni28": [
- 67
- ],
- "g62Ni28": [
- 1173
- ],
- "g63Ni28": [
- 155
- ],
- "g63Ni28(1.7us)": [
- 87.1
- ],
- "g65Ni28": [
- 692.3
- ]
- }
+ "g61Ni28": 67,
+ "g62Ni28": 1173,
+ "g63Ni28": 155,
+ "g63Ni28(1.7us)": 87.1,
+ "g65Ni28": 692.3
}
+ }
}
diff --git a/scripts/test/Muon/AxisChangerView_test.py b/scripts/test/Muon/AxisChangerView_test.py
index 3bfd0d114b4aa024da748720528011cab970757f..4744a42ab629ec519a0f56f58e0cf3d91b94b4bc 100644
--- a/scripts/test/Muon/AxisChangerView_test.py
+++ b/scripts/test/Muon/AxisChangerView_test.py
@@ -1,11 +1,12 @@
import unittest
-from Muon.GUI.ElementalAnalysis.Plotting.AxisChanger.axis_changer_view import AxisChangerView
+import os
+os.environ["QT_API"] = "pyqt" # noqa E402
+from Muon.GUI.ElementalAnalysis.Plotting.AxisChanger.axis_changer_view import AxisChangerView
from Muon.GUI.Common import mock_widget
-
try:
from unittest import mock
except ImportError: