diff --git a/Code/Mantid/docs/source/interfaces/Tomographic_Reconstruction.rst b/Code/Mantid/docs/source/interfaces/Tomographic_Reconstruction.rst index d31f16f6ad90f25f598f33de0f037bcb527bc861..10218297b0180cf65a005cfe5af11202a362303f 100644 --- a/Code/Mantid/docs/source/interfaces/Tomographic_Reconstruction.rst +++ b/Code/Mantid/docs/source/interfaces/Tomographic_Reconstruction.rst @@ -140,6 +140,43 @@ To be able to run jobs on a remote compute resource (cluster, supercomputer, etc You can monitor the status of the jobs currently running (and recently run) on remote compute resources in the same tab. +Setting common parameters for the reconstruction jobs +----------------------------------------------------- + +Several parameters can be set in the "ROI etc." section or tab. These +parameters will be used for all the reconstruction jobs, regardless of +the tool and/or reconstruction method used. + +* Region of interest (ROI) for the analysis +* Area for normalization (open beam, not blocked by sample) +* Center of rotation, for tomographic reconstruction + +At any stage during the process of selecting the regions it is also +possible to see how the selections fit different images by sliding +through the images of the stack (using the slider or scroll bar). + +The center of rotation can be selected interactively by clicking on +the select button and then clicking on an image pixel. To select the +regions of interest or the area of normalization, just click on the +respective "select" button and then click and drag with the mouse to +select a rectangle. The precise coordinates of the center and regions +can be set via the boxes of the right panel as well. + +Once you have selected or set one of the regions, or the center, they +can be selected again by pushing the respective "Select" buttons +and/or editing their coordinates manually. + +The default values, set in principle when a new stack of images is +loaded, is as follows. The region of intererest is set to cover all +the images. The regions of normalization is not set (empty), and the +center of rotation is set to the center of the image. The option to +find the center of rotation automatically is disabled at present. + +If when selection a region the mouse is moved outside of the images, +it is possible to continue the selection of the region (second corner) +by clicking again inside the image. Alternatively, any selection can +be reset at any point by using the "reset" buttons. + Running jobs locally --------------------