arldatastream.cc 6.61 KB
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#include "radixio/arldatastream.hh"

#include "radixbug/bug.hh"
#include "radixcore/stringfunctions.hh"
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#include "radixio/eafstream.hh"
#include "radixmath/util.hh"
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#include <fstream>
namespace radix
{
class ARLDataStream::PImpl
{
 public:
  std::string file;
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  std::shared_ptr<radix::eafstream> stream;
  int recordSize = 0;
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};

void ARLDataStream::expand(const std::string& val, ARLIndexHeader& index)
{
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  if (val.size() < indexHeaderLength)
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  {
    throw std::runtime_error(
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        "Incorrect size for string expansion to ARLIndexHeader.");
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  }
  index.year  = std::atoi(val.substr(0, 2).c_str());
  index.month = std::atoi(val.substr(2, 2).c_str());
  index.day   = std::atoi(val.substr(4, 2).c_str());
  index.hour  = std::atoi(val.substr(6, 2).c_str());
  index.ic    = std::atoi(val.substr(8, 2).c_str());
  index.il    = std::atoi(val.substr(10, 2).c_str());
  index.cgrid = val.substr(12, 2).c_str();
  index.kvar  = val.substr(14, 4);
  index.nexp  = std::atoi(val.substr(18, 4).c_str());
  index.prec  = float(std::atof(val.substr(22, 14).c_str()));
  index.var1  = float(std::atof(val.substr(36, 14).c_str()));
}
void ARLDataStream::expand(const std::string& val, const ARLIndexHeader& index,
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                           ARLRecordHeader& header)
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{
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  if (val.size() < recordHeaderLength)
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  {
    throw std::runtime_error(
        "Incorrect size for string expansion to ARLHeader.");
  }
  header.model_id = val.substr(0, 4);
  header.icx      = std::atoi(val.substr(4, 3).c_str());
  header.mn       = std::atoi(val.substr(7, 2).c_str());
  header.pole_lat = float(std::atof(val.substr(9, 7).c_str()));
  header.pole_lon = float(std::atof(val.substr(16, 7).c_str()));
  header.ref_lat  = float(std::atof(val.substr(23, 7).c_str()));
  header.ref_lon  = float(std::atof(val.substr(30, 7).c_str()));
  header.size     = float(std::atof(val.substr(37, 7).c_str()));
  header.orient   = float(std::atof(val.substr(44, 7).c_str()));
  header.tang_lat = float(std::atof(val.substr(51, 7).c_str()));
  header.sync_xp  = float(std::atof(val.substr(58, 7).c_str()));
  header.sync_yp  = float(std::atof(val.substr(65, 7).c_str()));
  header.sync_lat = float(std::atof(val.substr(72, 7).c_str()));
  header.sync_lon = float(std::atof(val.substr(79, 7).c_str()));
  header.dummy    = float(std::atof(val.substr(86, 7).c_str()));
  header.nx       = std::atoi(val.substr(93, 3).c_str());
  header.ny       = std::atoi(val.substr(96, 3).c_str());
  header.nz       = std::atoi(val.substr(99, 3).c_str());
  header.z_flag   = std::atoi(val.substr(102, 2).c_str());
  header.lenh     = std::atoi(val.substr(104, 4).c_str());

  int knx = ordinal(index.cgrid[0]);
  int kny = ordinal(index.cgrid[1]);
  // Check for the grid domain extending beyond 3 digits
  if (knx >= 64 || kny >= 64)
  {
    header.nx = (knx - 64) * 1000 + header.nx;
    header.ny = (kny - 64) * 1000 + header.ny;
  }
}

ARLDataStream::ARLDataStream(const std::string& file)
    : p(new PImpl(), [](PImpl* impl) { delete impl; })
{
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  p->file   = file;
  p->stream = std::make_shared<radix::eafstream>(
      p->file.c_str(), std::ios::in | std::ios::binary);
  if (!p->stream->is_open())
  {
    radix_line("Failed to open ARL file: " << file);
  }
}

bool ARLDataStream::read_index_header(ARLIndexHeader& iheader)
{
  std::string headerString = p->stream->readString(indexHeaderLength);
  expand(headerString, iheader);

  radix_line("Read index header: year = " << iheader.year);
  radix_line("                  month = " << iheader.month);
  radix_line("                    day = " << iheader.day);
  radix_line("                   hour = " << iheader.hour);
  radix_line("               variable = " << iheader.kvar);
  radix_line("       scaling exponent = " << iheader.nexp);
  radix_line("          initial value = " << iheader.var1);
  radix_line(headerString);
  return true;
}

bool ARLDataStream::read_next_index_header(ARLIndexHeader& iheader)
{
  int bytesToSkip = roundUpInt(p->stream->bytesRead(), p->recordSize) -
                    p->stream->bytesRead();
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  radix_line("Skipping " << bytesToSkip << " bytes to the next index header");
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  p->stream->skipBytes(bytesToSkip);

  return read_index_header(iheader);
}

bool ARLDataStream::read_record_header(const ARLIndexHeader& iheader,
                                       ARLRecordHeader& rheader)
{
  std::string headerString = p->stream->readString(recordHeaderLength);
  expand(headerString, iheader, rheader);

  // Calculate and save record size
  p->recordSize = (rheader.nx * rheader.ny) + indexHeaderLength;

  radix_line("  Read record header: model = " << rheader.model_id);
  radix_line("                         nx = " << rheader.nx);
  radix_line("                         ny = " << rheader.ny);
  radix_line("                         nz = " << rheader.nz);
  radix_line("        Size of each record = " << p->recordSize);
  radix_line(headerString);
  return true;
}

bool ARLDataStream::read_record(const ARLIndexHeader& iheader,
                                const ARLRecordHeader& rheader,
                                std::vector<std::vector<double> >& record)
{
  // Set up the vector size
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  record.clear();
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  record.resize(rheader.nx);
  for (std::vector<double>& vec : record)
  {
    vec.resize(rheader.ny);
  }

  // Calculate the scaling factor
  double scaleFactor = pow(2.0, 7.0 - (double)iheader.nexp), lastValue = 0.0;

  radix_line("    Reading record data:");
  for (int y = 0; y < rheader.ny; ++y)
  {
    for (int x = 0; x < rheader.nx; ++x)
    {
      // Read the raw value
      unsigned char ch = (unsigned char)p->stream->readChar();
      int packedValue  = ch - 127;
      //      int packedValue = p->stream->readChar() - 127;

      // Calculate the unpacked value
      double unpackedValue = 0.0;
      // Get the correct 'last value' if we are at a 0 index
      if (x == 0)
      {
        if (y == 0)
        {
          lastValue = iheader.var1;
        }
        else
        {
          lastValue = record[x][y - 1];
        }
      }

      unpackedValue = (packedValue / scaleFactor) + lastValue;
      record[x][y]  = unpackedValue;
      lastValue     = unpackedValue;

      if ((x < 2 && y < 2) || ((rheader.nx - x < 3) && (rheader.ny - y < 3)))
      {
        radix_line("      [" << x << "," << y << "]: packed = " << packedValue
                             << ", unpacked = " << unpackedValue);
      }
    }
  }

  return true;
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}

/**
 * @brief The ARLRecord::PImpl class
 */
class ARLRecord::PImpl
{
 public:
};
ARLRecord::ARLRecord()
    : p(new ARLRecord::PImpl(), [](ARLRecord::PImpl* impl) { delete impl; })
{
}

ARLRecord::ARLRecord(const ARLRecord& orig)
    : p(new ARLRecord::PImpl(), [](ARLRecord::PImpl* impl) { delete impl; })
{
}

}  // namespace radix