From c12668ea447e1206f81d4894034edfeffb465671 Mon Sep 17 00:00:00 2001 From: JeanBilheux Date: Sat, 26 May 2018 11:27:38 -0400 Subject: [PATCH 1/3] new page metadata_overlapping_images --- en/404.html | 18 +- en/capabilities/index.html | 924 +----- en/credits/index.html | 94 +- en/faq/index.html | 94 +- en/github/index.html | 94 +- en/index.html | 94 +- en/index.json | 11 +- en/links/index.html | 94 +- en/prepare_venue/access/index.html | 94 +- en/prepare_venue/index.html | 100 +- .../proposal_confirmation/index.html | 94 +- en/prepare_venue/safety/index.html | 94 +- en/prepare_venue/sample/index.html | 1144 +++++++- en/showcase/index.html | 94 +- en/sitemap.xml | 4 + en/tutorial/how_to_access_computer/index.html | 94 +- en/tutorial/how_to_access_data/index.html | 1144 +++++++- en/tutorial/how_to_other/index.html | 94 +- en/tutorial/how_to_run_imars3d/index.html | 1118 +------- en/tutorial/how_to_run_notebooks/index.html | 94 +- en/tutorial/how_to_start_notebooks/index.html | 94 +- en/tutorial/index.html | 752 ++++- en/tutorial/notebooks/bin_images/index.html | 94 +- .../calculate_water_intake_profile/index.html | 94 +- .../calibrated_transmission/index.html | 94 +- .../notebooks/combine_folders/index.html | 94 +- .../notebooks/combine_images/index.html | 94 +- .../index.html | 94 +- en/tutorial/notebooks/deal_files/index.html | 94 +- .../index.html | 94 +- .../index.html | 94 +- .../index.html | 94 +- .../index.html | 94 +- .../index.html | 94 +- .../notebooks/file_selector/index.html | 94 +- en/tutorial/notebooks/fix_images/index.html | 1118 +------- .../index.html | 94 +- .../format_filename_index/index.html | 94 +- .../notebooks/frederick_ipts/index.html | 94 +- .../index.html | 94 +- .../notebooks/gamma_filtering_tool/index.html | 94 +- en/tutorial/notebooks/index.html | 593 +--- .../notebooks/linear_profile/index.html | 94 +- .../notebooks/list_tiff_metadata/index.html | 94 +- .../notebooks/locate_pixels/index.html | 96 +- .../metadata_overlapping_images/index.html | 2526 +++++++++++++++++ .../notebooks/normalization/index.html | 96 +- .../notebooks/normalization_batch/index.html | 198 +- en/tutorial/notebooks/profile/index.html | 181 +- .../notebooks/radial_profile/index.html | 94 +- en/tutorial/notebooks/registration/index.html | 94 +- .../index.html | 94 +- .../rotate_and_crop_images/index.html | 94 +- en/tutorial/notebooks/select_ipts/index.html | 94 +- en/tutorial/notebooks/template_ui/index.html | 94 +- .../topaz_config_generator/index.html | 94 +- .../index.html | 94 +- es/404.html | 18 +- es/credits/index.html | 50 +- es/faq/index.html | 50 +- es/github/index.html | 50 +- es/index.html | 50 +- es/prepare_venue/index.html | 50 +- fr/404.html | 18 +- fr/credits/index.html | 50 +- fr/faq/index.html | 76 +- fr/github/index.html | 50 +- fr/index.html | 50 +- fr/prepare_venue/access/index.html | 50 +- fr/prepare_venue/index.html | 50 +- .../proposal_confirmation/index.html | 50 +- fr/prepare_venue/safety/index.html | 76 +- fr/prepare_venue/sample/index.html | 50 +- fr/tutorial/how_to_access_data/index.html | 154 +- fr/tutorial/index.html | 50 +- fr/vitrine/index.html | 76 +- .../profile/images/all_plots_all_files.png | Bin 0 -> 296070 bytes .../notebooks/profile/images/export_file.png | Bin 0 -> 302902 bytes .../profile/images/live_profile_plots.gif | Bin 0 -> 1744336 bytes .../profile/images/profile_selection.gif | Bin 0 -> 3785887 bytes .../profile/images/tab1_ui_presentation.png | Bin 0 -> 273346 bytes .../profile/images/tab2_ui_presentation.png | Bin 0 -> 210694 bytes .../profile/images/tab3_ui_presentation.png | Bin 0 -> 291163 bytes 83 files changed, 9584 insertions(+), 5361 deletions(-) create mode 100644 en/tutorial/notebooks/metadata_overlapping_images/index.html create mode 100644 tutorial/notebooks/profile/images/all_plots_all_files.png create mode 100644 tutorial/notebooks/profile/images/export_file.png create mode 100644 tutorial/notebooks/profile/images/live_profile_plots.gif create mode 100644 tutorial/notebooks/profile/images/profile_selection.gif create mode 100644 tutorial/notebooks/profile/images/tab1_ui_presentation.png create mode 100644 tutorial/notebooks/profile/images/tab2_ui_presentation.png create mode 100644 tutorial/notebooks/profile/images/tab3_ui_presentation.png diff --git a/en/404.html b/en/404.html index 7471129a..f57e2744 100644 --- a/en/404.html +++ b/en/404.html @@ -10,16 +10,16 @@ 404 Page not found - - - - - - - - + + + + + + + + - + + + + + + + + + + +
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Metatadata Overlapping Images

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Notebook name: metadata_overlapping_images.ipynb

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Description

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This notebook normalized the imaging data (tiff or fits) by removing the background and fixing the fluctuations of the +neutron beam. You will need:

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  • select your images
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  • select your open beam (OB)
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  • optional - select the dark field (DF)
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  • optional - select one or more background region in your sample images
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  • run the normalization
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  • select output folder where the normalized images will be saved
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Start the notebook

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If you need help accessing this notebook, check the How To > Start the python +notebooks tutorial.

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How to Use It?

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Select your IPTS

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Check the full tutorial here

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loading the Images

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You need to provide the list of samples, OB and DF (if needed). To do so, just SHIFT + ENTER the +following cell to display a selection tool wizard.

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The dialogbox will start listing the files from the IPTS folder you selected in the first cell. Feel free to navigate +to find your data set.

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Check the file selection tool tutorial +to learn how to use the file selector tool. +

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