files added

README.md

+# Preliminaries
+## Disclaimer and Licensing
+
+evendim is free software: you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation, either version 3 of the License, or
+(at your option) any later version.
+evendim is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU General Public License for more details.
+You should have received a copy of the GNU General Public License
+along with evendim. If not, see <http://www.gnu.org/licenses/>.
+The full software license for evendim version 1.0.0
+can be found in
+file LICENSE.
+
+## Please cite this work
+
+evendim is a free and open source genetic expression programming code. 
+The full software license for evendim version 0.
+can be found in
+file LICENSE.
+You are welcomed to use it and publish data
+obtained with evendim. If you do, please cite this
+work. Explain How To Cite This Work. FIXME. TBW.
+
+## References 
+
+## Hash of the latest commit
+
+Hash of the latest commit is also posted at
+FIXME
+
+# Building and Running evendim
+
+## Required Software
+
+* GNU C++
+* The LAPACK and BLAS libraries
+* The GSL library
+* PsimagLite (see below)
+
+## Optional Software
+
+* make or gmake (only needed to use the Makefile)
+* perl (may be needed to run some auxiliary script)
+
+## Quick Start
+
+1. Use your distribution repository tool to install gcc with support for C++,
+the LAPACK and BLAS libraries, the gsl library, make, perl, and git
+if you don't have them.
+
+2. Issue
+
+    cd someDirectory/
+
+    git clone https://github.com/g1257/PsimagLite.git
+
+    git clone https://github.com/g1257/evendim.git
+
+3. Compile PsimagLite
+
+4. Now issue
+
+    cd evendim/src
+
+    cp Config.make.sample Config.make
+
+    make
+
+5. You can run it with TBW.
+

src/Config.make.sample

+# PsimagLite support is needed by Gep
+LDFLAGS = -L../../PsimagLite/lib -lpsimaglite
+
+# Compiler to use. If using MPI then say mpicxx here (or mpic++)
+# and also say -DUSE_MPI below
+CXX = g++
+
+# We're using ansi C++
+CPPFLAGS += -pedantic -std=c++98
+
+# Enable MPI (you must set the proper
+# compiler wrapper under CXX above)
+# CPPFLAGS += -DUSE_MPI
+
+# Here add -lpthread if threading is needed and also
+# set -DUSE_PTHREADS below
+#LDFLAGS += -lpthread
+
+# Enable pthreads
+#CPPFLAGS += -DUSE_PTHREADS
+
+# Enable warnings and treat warnings as errors
+CPPFLAGS += -Wall -Werror -Wendif-labels
+
+# This disables debugging
+#CPPFLAGS += -DNDEBUG
+
+# Optimization level here
+#CPPFLAGS += -O3
+
+# This enables partial debugging (make sure to comment out previous line)
+CPPFLAGS +=   -g3
+
+# This enables additional debugging
+#CPPFLAGS += -D_GLIBCXX_DEBUG -D_GLIBCXX_PROFILE
+
+# This makes the code use long instead of short integers
+#CPPFLAGS +=-DUSE_LONG
+
+# This makes the code use float instead of double
+#CPPFLAGS += -DUSE_FLOAT
+
+# This enables signals
+#CPPFLAGS +=-DUSE_SIGNALS
+
+# This enables gsl support
+#CPPFLAGS +=-DUSE_GSL
+#LDFLAGS += -lgsl -lgslcblas
+
+# This enables the custom allocator (use only for debugging)
+#CPPFLAGS += -DUSE_CUSTOM_ALLOCATOR
+
+# Specify the strip command to use or use true to disable
+STRIP_COMMAND = true
+

src/Makefile

+include Config.make
+CPPFLAGS += -I../../PsimagLite -I../../PsimagLite/src -IEngine
+all: gep2
+
+gep2.o: gep2.cpp  Makefile   Config.make
+	$(CXX) $(CPPFLAGS) -c gep2.cpp
+
+gep2: gep2.o
+	$(CXX) -o  gep2 gep2.o $(LDFLAGS) $(CPPFLAGS)
+	$(STRIP_COMMAND) gep2
+
+../../PsimagLite/lib/libpsimaglite.a:
+	$(MAKE) -f Makefile -C ../../PsimagLite/lib/
+
+Makefile.dep: gep2.cpp
+	$(CXX) $(CPPFLAGS) -MM gep2.cpp  > Makefile.dep
+
+clean: Makefile.dep
+	rm -f core* gep2 *.o *.dep
+
+include Makefile.dep