Merge pull request #106 from ESGF/issue/104/build-errors

ENV ESGINI /esg/config/esgcet/esg.ini

ENV UVCDAT_ANONYMOUS_LOG no

# Install dependencies using conda

# Install dependencies

# NOTE: esgprep has very specific version requirements

ARG CDAT_LABEL_CHANNEL=cdat/label/80

RUN conda install -y -c $CDAT_LABEL_CHANNEL -c conda-forge -c cdat \

      psycopg2 \

      lxml \

      cdutil \

      gcc_linux-64 \

      'requests==2.20.0' \

      'netCDF4==1.4.0'

# Make the conda-installed gcc available as gcc

#   netCDF4 1.4.0 must be installed using pip as it conflicts with the

#   dependency specification for later versions of libcdms

# Also make the conda-installed gcc available as gcc

#   See https://conda.io/docs/user-guide/tasks/build-packages/compiler-tools.html

RUN ln -s /opt/conda/bin/x86_64-conda_cos6-linux-gnu-gcc /usr/local/bin/gcc

ARG CDAT_LABEL_CHANNEL=cdat/label/v81

RUN conda install -y -c conda-forge -c $CDAT_LABEL_CHANNEL \

      gcc_linux-64 \

      lxml \

      cdtime \

      cdms2 \

      'psycopg2<2.7' \

      'requests==2.20.0' && \

    pip install \

      'netCDF4==1.4.0' && \

    ln -s /opt/conda/bin/x86_64-conda_cos6-linux-gnu-gcc /usr/local/bin/gcc

# Install the publisher client from GitHub

# TODO: REMOVE PATCH

# Before installing, patch the publisher to fix this issue - https://github.com/ESGF/esg-publisher/issues/133

ARG ESG_PUBLISHER_VERSION=v3.5.5

ARG ESG_PUBLISHER_VERSION=v3.6.3

RUN git clone https://github.com/ESGF/esg-publisher.git /application && \

    cd /application && \

    git checkout $ESG_PUBLISHER_VERSION && \

    cd src/python/esgcet && \

    sed -i \

      "s/config.get('DEFAULT', 'hessian_service_certs_location')/getConfig().get('DEFAULT', 'hessian_service_certs_location')/g" \

      ./esgcet/publish/utility.py && \

    python setup.py install && \

    cd