This patch modifies classes that broke the "rule of three", which
states that classes that declare a destructor must also declare a
copy constructor and assigment operator.

Change-Id: I06b1bb45b493e80e0bae0e8668aa09f494b8056e

Their declaration violates the 'rule of 3' and was
causing compiler warnings with clang's -Wdeprecated
in C++11.

Change-Id: I959d582deea4ceccc69684be32dccd3521f54807

The main change is to remove the use of vtkTemporalDataSet and move
the support of multiple temporal data sets from the execution
pipeline to filters. To be specific,

- Before, a filter can request objects from multiple time steps by
  setting the key UPDATE_TIME_STEPS to a vector of doubles; the
  resulting objects get wrapped by the pipeline into a single
  vtkTemporalDataSet object.

- After, a filter can only ask for a single time step from the
  pipeline by setting the key UPDATE_TIME_STEP to a single double.
  The "wrapping" no longer happens. If a filter want to request
  multiple time steps, it needs to either inherit from
  vtkMultiTimeStepAlgorithm or use the CONTINUE_EXECUTION to loop the
  upstream pipeline and store the data from each iteration.

The following key changes/constants are backward incompatible:

vtkStreamingDemandDrivenPipeline::UPDATE_TIME_STEPS(() ->
   vtkStreamingDemandDrivenPipeline::UPDATE_TIME_STEP((),
   vtkMultiStepAlgorithm::UPATE_TIME_STEPS()

vtkStreamingDemandDrivenPipeline::PREVIOUS_UPDATE_TIME_STEPS() ->
  vtkStreamingDemandDrivenPipeline::PREVIOUS_UPDATE_TIME_STEP()

deleted: vtkCompositeDataPipeline::REQUIRES_TIME_DOWNSTREAM()

depreicated: VTK_TIME_EXTENT

Change-Id: I635b6401ae4f0a7ea7c4b5c466ced40ee75963c7

Move source files from their former monolithic VTK location to their new
location in modular VTK without modification.  This preserves enough
information for "git blame -M" and "git log --follow" to connect
modularized VTK files to their original location and history.

Co-Author: Marcus D. Hanwell <marcus.hanwell@kitware.com>
Co-Author: Chris Harris <chris.harris@kitware.com>
Co-Author: Brad King <brad.king@kitware.com>
Co-Author: Nikhil Shetty <nikhil.shetty@kitware.com>

This fixes a number of misspellings in the comments of
the source files in VTK/IO. The misspellings were
found using the codespell tool.

Change-Id: I4e6c9689fac5a4123584251080d96704ed4b6b83

The vtkstd forwarding headers are deprecated, move to using the STL
headers directly.

Change-Id: Iaeb5ea0c10d40b8e934b6a8ca18f28c3b022b924

Commit c145092a (ENH: Major update to the OpenFOAM reader from Takuya
Oshima, 2010-01-08) updated vtkOpenFOAMReader from a version developed
outside of VTK.  The outside version used a preprocessor test against
vtksys_DATE_STAMP_FULL (from KWSys DateStamp) that is unnecessary when
built inside VTK.

Change-Id: Iffb77766301d3abbcd339b8c76769d78d5bf8d47

The OpenFOAM private class should not be exporting its symbols.

Change-Id: I1122355dd81ff7faed02c167cf70a119dc63da53

Change-Id: I88b47c95a04c15ebe242dc289b6f5bc27540e150

This fixes bug #12318.

Change-Id: I90e7ecb60dd3abdda33597f4a3e84a8be2a59683

This fixes bug #12318.

Change-Id: I90e7ecb60dd3abdda33597f4a3e84a8be2a59683

Fixes 0011974.

The OpenFOAM reader used vtkDataArrayTemplate::Resize() in order to
extend allocated memory space since the function has allocated
more memory space than requested when the requested size was larger
than the original size. However, with commit
c869c3d5

, the function now produces
an array of the exact requested size. The behavioral change caused
the reader heavy repetitive resizings.

Signed-off-by: David Partyka <dave.partyka@kitware.com>

The CVS $Revision$ keyword replacement will no longer maintain these
macros automatically.  They were used only to implement CollectRevisions
and vtkObjectBase::PrintRevisions, an API that was never used.

Automated as follows:

  pass 0:
  catch templates
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro' | grep '<'

  pass 1:
  main changes
  ---------------
  $ git grep -l '^vtkCxxRevisionMacro' | while read file; do
    echo "$file" 1>&2
    perl -i -ne 'print unless (/^vtkCxxRevisionMacro/ and /\)/)' $file
  done
  $ git grep -l -e 'vtkTypeRevisionMacro(' | while read file; do
    echo "$file" 1>&2
    perl -i -pe 's/vtkTypeRevisionMacro/vtkTypeMacro/g' $file
  done

  pass 2:
  verify
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro'

Fixed multi-line vtkCxxRevisionMacro and templates by hand.

- #includeIfPresent directive: as per #include, but fails silently
  if the file does not exist

- support the $FOAM_CASENAME expansion, which is roughly equivalent to
  the basename of $FOAM_CASE

- #inputMode default is equivalent to #inputMode merge (not error)
  with OpenFOAM-1.6

- some provisioning for #inputMode (protect|warn), but not yet
  implemented

The CVS $Revision$ keyword replacement will no longer maintain these
macros automatically.  They were used only to implement CollectRevisions
and vtkObjectBase::PrintRevisions, an API that was never used.

Automated as follows:

  pass 0:
  catch templates
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro' | grep '<'

  pass 1:
  main changes
  ---------------
  $ git grep -l '^vtkCxxRevisionMacro' | while read file; do
    echo "$file" 1>&2
    perl -i -ne 'print unless (/^vtkCxxRevisionMacro/ and /\)/)' $file
  done
  $ git grep -l -e 'vtkTypeRevisionMacro(' | while read file; do
    echo "$file" 1>&2
    perl -i -pe 's/vtkTypeRevisionMacro/vtkTypeMacro/g' $file
  done

  pass 2:
  verify
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro'

Fixed multi-line vtkCxxRevisionMacro and templates by hand.

ENH: Combined Takuya's OpenFoamReader patch for loading polyhedron. Also changed clip and contour codes of vtkPolyhedron.

* fixed warnings reported on the dashboard ("declaration of
 dict shadows a previous local")
* fixed array/mesh region selection status in state file being
 discarded (important fix to load the following state files)
* fixed failure in loading certain types of meshes

ENH: Merge changes from main tree into VTK-5-2 branch. (cvs -q up -j1.12 -j1.13 IO/vtkOpenFOAMReader.cxx)

redesign can be found at http://www.vtk.org/Wiki/VTK/Composite_Data_Redesign.

BUG: Fix bug 1953: replace strstream use with stringstream now that kwsys provides stringstream on all platforms. Many thanks to Sean McBride and Mathieu Coursolle from Rogue Research for all their effort developing the patch (and patience in waiting for its commit...!). COMP: Eliminate performance warning in generated Java wrappers regarding jboolean cast to bool. ENH: Exclude Java and Python wrappers (in addition to already excluded Tcl wrappers) from coverage analysis.

ENH: Adding the fluent, openfoam and mfix readers again. Hopefully, all of the compile issues are now fixed.