Commit 23125825 authored by McDonnell, Marshall's avatar McDonnell, Marshall
Browse files

Switch from repeat to multiple true for peak finding tool

parent a0573a9b
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+6 −9
Original line number Diff line number Diff line
@@ -9,7 +9,7 @@

        ##Move files to execution directory
        #for $data in $data_files
            cp $data.data_file.file_name in/$data.data_file.element_identifier &&
            cp $data in/$data.element_identifier &&
        #end for

        peak_finding 
@@ -22,10 +22,7 @@

    ]]></command>
    <inputs>
        <repeat name="data_files" title="Data Files">
            <param name="data_file" type="data" format="txt" label="Data File">
            </param>
	    </repeat>
        <param format="txt" multiple="true" name="data_files" type="data" label="Data Files" />
        <param name="instrument" type="select" label="Select instrument name:" optional="false">
            <option value="DEMAND" selected="true">DEMAND</option>
        </param>
@@ -46,10 +43,10 @@
    </help>
    <tests>
        <test>
            <param name="dataFiles_0|dataFile" value="HB3A_exp770_scan0008_0001.jpg" />
            <param name="dataFiles_1|dataFile" value="HB3A_exp770_scan0008_0002.jpg" />
            <param name="dataFiles_2|dataFile" value="HB3A_exp770_scan0009_0001.jpg" />
            <param name="dataFiles_3|dataFile" value="HB3A_exp770_scan0009_0002.jpg" />
            <param name="data_files_0|dataFile" value="HB3A_exp770_scan0008_0001.jpg" />
            <param name="data_files_1|dataFile" value="HB3A_exp770_scan0008_0002.jpg" />
            <param name="data_files_2|dataFile" value="HB3A_exp770_scan0009_0001.jpg" />
            <param name="data_files_3|dataFile" value="HB3A_exp770_scan0009_0002.jpg" />
            <param name="scan_average" value="yes"/>
            <param name="file_type" value="jpg"/>
            <param name="peak_threshold" value="0.0035"/>