LEX-0.1-alpha

 An alpha version of the LIVVkit Extensions repository to demonstrate
 our extension functionality. It includes the CESM Greenland analyses of
 cloud cover, energy balance and surface mass balance, as will be
 documented in the Evans et al. (2018) LIVVkit validation paper, which
 will be submitted soon.

setup/rhea.sh

+#!/usr/bin/env bash
+
+if [ -d "$HOME/.local/bin" ]; then 
+    case ":$PATH:" in 
+        *:$HOME/\.local/bin:*)
+            # echo 'on path'
+            ;;
+        *)
+            echo '$HOME/.local/bin not found in $PATH. Adding it to $PATH'
+            export PATH=$PATH:$HOME/.local/bin
+            ;;
+    esac
+fi
+
+if [ -d "$HOME/.modulefiles" ]; then
+    case ":$MODULEPATH:" in
+        *:$HOME/\.modulefiles:*)
+            # echo 'on path'
+            ;;
+        *)
+            echo '$HOME/.modulefiles not found in $MODULEPATH. Adding it to $MODULEPATH'
+            export MODULEPATH=$HOME/.modulefiles:$MODULEPATH
+            ;;
+    esac
+fi
+
+if [ ! -x "$(command -v git-lfs)" ]; then
+    echo '!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!'
+    echo 'git-lfs not installed! Installing... into $HOME/.local/bin'
+    echo '!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!'
+    
+    mkdir -p $HOME/.local/lib
+    pushd $HOME/.local/lib
+    
+    wget https://github.com/git-lfs/git-lfs/releases/download/v2.3.4/git-lfs-linux-amd64-2.3.4.tar.gz
+    tar -zxf git-lfs-linux-amd64-2.3.4.tar.gz
+    cd git-lfs-2.3.4
+
+    sed -i 's/\/usr\/local/\$HOME\/.local/g' install.sh
+    . install.sh
+
+    popd
+    echo 'In the future, be sure to include $HOME/.local/bin in your path:'
+    echo '    export PATH=$PATH:$HOME/.local/bin'
+    echo 'Note: You will likely want to put this in your .bashrc, or similar.' 
+fi
+
+if [[ $(hostname -s) = rhea* ]]; then
+    module unload PE-pgi PE-gnu PE-intel
+    module load PE-gnu/4.8.2
+
+    module unload nco ncl netcdf gcc
+    module load netcdf/4.4.1
+    module load gsl hdf5-parallel
+    module load nco/4.6.9
+
+    module load anaconda-cli106/rhea
+    module list
+
+    . deactivate && . activate LIVVpy2
+fi
+
+
+