Commit 98c0230d authored by David M. Rogers's avatar David M. Rogers
Browse files

Removed direct pymongo import.

parent baccadc8
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+0 −10
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@@ -64,16 +64,6 @@ def insert_loop(tname):

        return (shard, fname, k)

        # raw mongodb commands:
        #try:
        #    cpds.insert_many(info)
        #except Duplicate:
        #    pass
        #try:
        #    atypes.insert_one({'_id':fname, 'fullname':name})
        #except Duplicate:
        #    pass

def main(shards):
    logging.basicConfig(stream=sys.stdout, level=logging.DEBUG)
    with MPICommExecutor(MPI.COMM_WORLD, root=0) as executor:
+0 −6
Original line number Diff line number Diff line
import pymongo
import tarfile as tf
from pathlib import Path
Duplicate = pymongo.errors.DuplicateKeyError

def get_mdb():
    mclient = pymongo.MongoClient("mongodb://signac:covid19-scalable@mongodb-signac-bif128.apps.marble.ccs.ornl.gov", port=30594)
    return mclient["signac"]

# FIXME: parse sys.env['SLURM_NODELIST'] = "rhea[473,509]"
def get_rdb(name=None):